PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003300.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 290aa    MW: 32681.8 Da    PI: 6.8009
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003300.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-19133182255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            +y+GVr+++ +g+W+AeIrdp     + +r++lg+f tae Aa a+++a+++++g
  Cse_sc003300.1_g030.1 133 HYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTFETAEAAALAYDEAALRFKG 182
                            7********.**********93....36***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MCGRGQPFGY IAHRFAWRGN DTTNQRGPRV VENEDLFKQV KELQKFVVKV DHRRHGKRAL  60
PADESEENVE EHQQNEEQQL FPAYSLQSQE DMSAIVSALS QVIGTTGDTP FSTCANPNQQ  120
PQSQEQGNQR RRHYRGVRQR PWGKWAAEIR DPQKAARVWL GTFETAEAAA LAYDEAALRF  180
KGTKAKLNFP ERVQGRTELG YFITRPQLQM SDSFVPTSHT PHLRPPSQSS YPNLHDYTNF  240
LRGANEHGMS TSDSSVLNST TSSSIDMGSS SSVGASQYWQ DFDPTNESGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.16e-26ERF family protein