PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003244.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 617aa MW: 69251 Da PI: 4.1997

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003244.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.7	1.9e-52	21	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 l+pGfrFhPtdeelv +yL++k+ g++++ ++i++v++ykvePwdLp +++k+++ ewyfFs dkky +g+r+nrat++gyWk+t Cse_sc003244.1_g060.1 21 LAPGFRFHPTDEELVFYYLRRKICGRPFRY-DAISDVEVYKVEPWDLPdlSRLKTRDLEWYFFSVLDKKYGNGSRTNRATDRGYWKTT 107 579************************9.99**********96448888889************************** PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 gkd++v++ +++lvg+kktLv++ grapkge+t+Wvmheyrl Cse_sc003244.1_g060.1 108 GKDRSVYH-RSQLVGMKKTLVYHIGRAPKGERTNWVMHEYRL 148 ****.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MAIVIDSNQP TETGQSQSQS LAPGFRFHPT DEELVFYYLR RKICGRPFRY DAISDVEVYK 60 VEPWDLPDLS RLKTRDLEWY FFSVLDKKYG NGSRTNRATD RGYWKTTGKD RSVYHRSQLV 120 GMKKTLVYHI GRAPKGERTN WVMHEYRLID QELEKKGIQD SFVLCRIFRK SGSGPKNGEQ 180 YGAPFVEEEW DVDEPILATK QESAMQFPVD YEDDAYLDED DIEQILGSDV PPKDGPLLLD 240 YHQRDNVNSA DVSSETIDDP QSALVDQPQA NNEDVPKLFD LPVQNELDPT SVKHEYIADL 300 SNDVDYDVDY LLDAPYFDAS TGDLQFDGNS FFESDDLQTE VKTESGVEMF NDYTSFLNPE 360 MENLDYAFDS FVNENILAES PLIFEDAKEE THQLGDISDQ FFEDQNNDFA SSKDGSGLAT 420 GDLEGQNYNG ASTSNQEHPD SAETSHAEGN HETSAASQQL FEGPSNDLVS SKQQEADMPT 480 DIAYPFLQRA SYMLGNMSAS SAYASECSAK YLAAAAAQAS TSVRVTTGII RIRDISFADS 540 KLDWSFGKNG HLDIVFSFGL GQSDVNSANS HEAVGLSSRK ANSSVSRNWL YCLFLCIMVL 600 SLSSKIRSLV CPRSYMS

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MAIVIDSNQP TETGQSQSQS LAPGFRFHPT DEELVFYYLR RKICGRPFRY DAISDVEVYK  60
VEPWDLPDLS RLKTRDLEWY FFSVLDKKYG NGSRTNRATD RGYWKTTGKD RSVYHRSQLV  120
GMKKTLVYHI GRAPKGERTN WVMHEYRLID QELEKKGIQD SFVLCRIFRK SGSGPKNGEQ  180
YGAPFVEEEW DVDEPILATK QESAMQFPVD YEDDAYLDED DIEQILGSDV PPKDGPLLLD  240
YHQRDNVNSA DVSSETIDDP QSALVDQPQA NNEDVPKLFD LPVQNELDPT SVKHEYIADL  300
SNDVDYDVDY LLDAPYFDAS TGDLQFDGNS FFESDDLQTE VKTESGVEMF NDYTSFLNPE  360
MENLDYAFDS FVNENILAES PLIFEDAKEE THQLGDISDQ FFEDQNNDFA SSKDGSGLAT  420
GDLEGQNYNG ASTSNQEHPD SAETSHAEGN HETSAASQQL FEGPSNDLVS SKQQEADMPT  480
DIAYPFLQRA SYMLGNMSAS SAYASECSAK YLAAAAAQAS TSVRVTTGII RIRDISFADS  540
KLDWSFGKNG HLDIVFSFGL GQSDVNSANS HEAVGLSSRK ANSSVSRNWL YCLFLCIMVL  600
SLSSKIRSLV CPRSYMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	2e-96	NAC family protein