PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003200.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 454aa    MW: 52268.6 Da    PI: 8.976
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003200.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.34.8e-12471221398
                            TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                     B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                            + +l++pk+f ++   ++   k+++l+    r+W + +  + k+   v+++ W++Fv +ng++e Df+vFk++g++ f   ++vf+
  Cse_sc003200.1_g030.1  47 KFNLSIPKSFWTNS--NEGICKKVVLRR-GCREWPMDI--SDKG---VFSDAWRKFVMDNGVQEFDFIVFKHQGNMMF--DFMVFD 122
                            3459******8443..234566777655.77*******..4444...89**********************9999888..666666 PP
2B352.31e-162152971095
                            HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
                     B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 
                            ++++ +l+lp  f   +g+k   + +++l++ +grsW+++l  +k +++ ++l+ G k+F++angLk+gD   F+l+++ +++ +vv 
  Cse_sc003200.1_g030.1 215 TFRTPCLYLPVAFSIPNGLK--IG-EMILRNDKGRSWTIQL--KKMGKKyFYLGCGLKDFCNANGLKVGDAYKFELIKNeKDKPPVVN 297
                            4455559******9999998..44.7***************..66555569**************************99777777775 PP
3B358.51.2e-18360445591
                            -..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
                     B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                            +++s+v +++ l+l kkfa+++g+ ++e  +++l++ ++  sW+v+l+ +++ + +++++GWkeF  angLk+gD + F+l+++ ++ 
  Cse_sc003200.1_g030.1 360 EVKSYVVEKR-LYLRKKFARKNGLFNKE--EMILKNvRNEGSWTVELKSSNNNKYCYIGRGWKEFYVANGLKDGDLFKFELIDNgEKP 444
                            5688999885.***********877444..7999997788*******99999999**************************9875554 PP

                            . CS
                     B3  91 e 91 
                            +
  Cse_sc003200.1_g030.1 445 T 445
                            4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
MEDAMTVADL NKDGGVVGGN NDGIQHSETA MTDPPNHFFK FIPPGFKFNL SIPKSFWTNS  60
NEGICKKVVL RRGCREWPMD ISDKGVFSDA WRKFVMDNGV QEFDFIVFKH QGNMMFDFMV  120
FDQSTCERPH PNLLDEIDVQ DHIHERSKKS KKRKRNDYSC RKEDKSHLNG DKLGKKPVRD  180
DHIQLQKETS LTSKKETNMT SNNHSYFVST LKPCTFRTPC LYLPVAFSIP NGLKIGEMIL  240
RNDKGRSWTI QLKKMGKKYF YLGCGLKDFC NANGLKVGDA YKFELIKNEK DKPPVVNFSL  300
NVDCTMDAEK PIKGSDSIHK LTSFDALDVE EPLTGSDSNY TDLYEDLARG KKNYPYFIGE  360
VKSYVVEKRL YLRKKFARKN GLFNKEEMIL KNVRNEGSWT VELKSSNNNK YCYIGRGWKE  420
FYVANGLKDG DLFKFELIDN GEKPTANFHF QSIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.13e-37B3 family protein