PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003163.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YA
Protein Properties Length: 261aa    MW: 29107.4 Da    PI: 8.9838
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003163.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.12.6e-32152208158
              CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                            d p+YVNaKQy++Il+RRq Rakle+++kl  k+rkpylheSRhkhAl+R RgsgGrF
  Cse_sc003163.1_g050.1 152 DGPIYVNAKQYNGILRRRQIRAKLEAQNKL-VKNRKPYLHESRHKHALNRVRGSGGRF 208
                            57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MPNLTQHHLS FLLPSSTSQQ SLKMVPAPHF SADELTHNQD SSTGHSSDQS NKDDDISTQL  60
VHSQDQCISS SSDESYKRLE EAQIKPILFM GNPSFGMTDQ QLEKNMPIVQ NAYADHYLNG  120
VYAGYAPHPM IQPHMVHIAP ARVPLPLDLS EDGPIYVNAK QYNGILRRRQ IRAKLEAQNK  180
LVKNRKPYLH ESRHKHALNR VRGSGGRFLP SNKQQQSKPA SRFLSSHCSS ASYPSGSDHG  240
FSSISWGNEG FLSNGDHNIG R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.13e-38NF-YA family protein