PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc003149.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 235aa MW: 26020.5 Da PI: 7.3851 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.5 | 3.3e-10 | 32 | 78 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h Er+RR+riN ++ Lr+ P + K +Ka++L+++v+ +k+L Cse_sc003149.1_g030.1 32 QKHALSERKRRKRINGHYDSLRQFFPRL-----LKSDKASVLTETVRRLKEL 78 7899***********************6.....49************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MNTYNGGDSS SSSDKGLVTV AKLEVMTDLA SQKHALSERK RRKRINGHYD SLRQFFPRLL 60 KSDKASVLTE TVRRLKELKT IITNITSSYN DGDSRSSLFI PGENDEASVN YCDNGGNKAT 120 IQATICCDDR PDLNQDLMEA IQSVGGKVVK AEIATVGGRT KVEVMVEWPE CNGGEEDVLL 180 LRRALKAVVE NRVLGRAGFV RHVFTEPEFI GLGRKSDVYE KIETMLADGL VVRSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38070.1 | 4e-25 | bHLH family protein |