PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003133.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 443aa MW: 52551.9 Da PI: 8.7235

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003133.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.1	3.5e-24	42	135	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtklele 84 fY++YAk+ GFsvr + +++k++ge ++r f C +eg++e + +++k++r+r ++r+gCka++++k+++ ++w+v++++ e Cse_sc003133.1_g030.1 42 FYQKYAKMNGFSVRYGRFENKKKTGEKKRRGFFCHREGFPEGKVVDNSKKQRNRGSSRCGCKAHMRIKLKRineifLEEWQVIQFVAE 129 9*******************************************9*****************99885455579***** PP FAR1 85 HnHela 90 HnH l Cse_sc003133.1_g030.1 130 HNHVLL 135 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MREELFDLNE MQTEKEVESH RENVDTPFIG QCFLSEDEAF LFYQKYAKMN GFSVRYGRFE 60 NKKKTGEKKR RGFFCHREGF PEGKVVDNSK KQRNRGSSRC GCKAHMRIKL KRINEIFLEE 120 WQVIQFVAEH NHVLLSTEEV RFLPSYRCIT VEDANRILML KEGGLSVRQI MRVMELERNV 180 RHGELSFLLK DVHNFLNKFH RIHSKNDVRD LLKYCEQTKS ENPNFQYTYT VDGESRLEHI 240 YWSHAHNFDW YKKYGDVVVF DTTYKVNSYD MPFGIFVGID NHRRTILLGC ALLRNETTNT 300 FQWLFKPPQT ILTDQDPWMS EAIAQEMSTT KHAFCIWHIT TKFSGWFNSL LRSEYSSGVR 360 TFTIYTNTVE DFEQQWPLVI AKYNLNDNKH RILGARLSSW FLFDGMTTTG RSESINAFIK 420 RFLSSRTCLN QFVRQVIGYL IEL

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MREELFDLNE MQTEKEVESH RENVDTPFIG QCFLSEDEAF LFYQKYAKMN GFSVRYGRFE  60
NKKKTGEKKR RGFFCHREGF PEGKVVDNSK KQRNRGSSRC GCKAHMRIKL KRINEIFLEE  120
WQVIQFVAEH NHVLLSTEEV RFLPSYRCIT VEDANRILML KEGGLSVRQI MRVMELERNV  180
RHGELSFLLK DVHNFLNKFH RIHSKNDVRD LLKYCEQTKS ENPNFQYTYT VDGESRLEHI  240
YWSHAHNFDW YKKYGDVVVF DTTYKVNSYD MPFGIFVGID NHRRTILLGC ALLRNETTNT  300
FQWLFKPPQT ILTDQDPWMS EAIAQEMSTT KHAFCIWHIT TKFSGWFNSL LRSEYSSGVR  360
TFTIYTNTVE DFEQQWPLVI AKYNLNDNKH RILGARLSSW FLFDGMTTTG RSESINAFIK  420
RFLSSRTCLN QFVRQVIGYL IEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	1e-117	FAR1 family protein