PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003114.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 821aa MW: 95190.2 Da PI: 8.2992

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003114.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.6	5.4e-20	58	167	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....................tekerrtraetrtgCkaklkv 68 kfY+eYA+e GF+vr+ ++++k++++ + f+Cs+eg + + k++ ++ +rr+ra++r+gCka l++ Cse_sc003114.1_g020.1 58 KFYKEYAREGGFEVRRGGQSNRKKKQNPDLKYFCCSREGVKPSPKDDiskkdkskmdtpssdiaevvKVIKRRKRASQRCGCKALLRL 145 6**************9999999999*********9999998999************9999************** PP FAR1 69 kkekdgkwevtkleleHnHela 90 ++ ++k++v+ + ++HnH+l+ Cse_sc003114.1_g020.1 146 GQTPENKYVVYIFFEKHNHSLV 167 ******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 821 aa Download sequence
MSNSIEDDSM QDNDVDAESV THAGTYQPTP PGSKFWIPEA KNKPVEGTQF DTIEQALKFY 60 KEYAREGGFE VRRGGQSNRK KKQNPDLKYF CCSREGVKPS PKDDISKKDK SKMDTPSSDI 120 AEVVKVIKRR KRASQRCGCK ALLRLGQTPE NKYVVYIFFE KHNHSLVHEN DYKYLRAARK 180 LTFSKQNLLR QLSNANRTRA WKVMLEMYGG FENIGVTDVE CRNYRRDLDK FIGNRDAQMV 240 VDKLLSRQEF FSDFSVEYKQ HKKEKTLIGL FWADSQAKLN YAAFGDVVSF DATFRSNSPH 300 LDPVCCEHPS VVYQVCCEQQ GYKMVLVPFT GIDNHNRCIL FGAALLASEA AKRYTWLLKR 360 FKKIFGSAPK VVITDQDPSM KIAIEKIFPD SRHRLCMWHI MQKLSGKVGP ALCSNTDFKR 420 RLCDIVWTEK IDSDVFETEW VSIMNDFNLN NNKWLNDMFA MRTKWIPAYF RHEPMSGLMR 480 TTSRSESENH FLGQITNPNL SLIEFLSHYD TAIDSQRFIN GKNTHDSNYK TPAFKTHLQI 540 EREAAKFYTH TIFYDVQDEI FSSLMHCCSL SVQESDSCST FVIRDTEADY RINDSFVESK 600 YEVRYVPDQC FAQCTCLRYE CYGLLCRHIF YVLRMSKVFH FPKQYMDNRW SKQAISHKFV 660 ESRKAYPATT NSDYVVDATL RDIYSNVEES INHLVGDIQK LHIYRDDQLA LMEKAKLDVP 720 NPPKLNTNEA YARALGVTEP AELNILTPTD IDNKGQVIRT RLKSKLEIAT DLADKPKRKC 780 KSCGKMARHD SRNCPKKRKG LQDEDVDEDV DQYMDDSDYF L

Sequence ? help Back to Top

Protein Sequence Length: 821 aa Download sequence

MSNSIEDDSM QDNDVDAESV THAGTYQPTP PGSKFWIPEA KNKPVEGTQF DTIEQALKFY  60
KEYAREGGFE VRRGGQSNRK KKQNPDLKYF CCSREGVKPS PKDDISKKDK SKMDTPSSDI  120
AEVVKVIKRR KRASQRCGCK ALLRLGQTPE NKYVVYIFFE KHNHSLVHEN DYKYLRAARK  180
LTFSKQNLLR QLSNANRTRA WKVMLEMYGG FENIGVTDVE CRNYRRDLDK FIGNRDAQMV  240
VDKLLSRQEF FSDFSVEYKQ HKKEKTLIGL FWADSQAKLN YAAFGDVVSF DATFRSNSPH  300
LDPVCCEHPS VVYQVCCEQQ GYKMVLVPFT GIDNHNRCIL FGAALLASEA AKRYTWLLKR  360
FKKIFGSAPK VVITDQDPSM KIAIEKIFPD SRHRLCMWHI MQKLSGKVGP ALCSNTDFKR  420
RLCDIVWTEK IDSDVFETEW VSIMNDFNLN NNKWLNDMFA MRTKWIPAYF RHEPMSGLMR  480
TTSRSESENH FLGQITNPNL SLIEFLSHYD TAIDSQRFIN GKNTHDSNYK TPAFKTHLQI  540
EREAAKFYTH TIFYDVQDEI FSSLMHCCSL SVQESDSCST FVIRDTEADY RINDSFVESK  600
YEVRYVPDQC FAQCTCLRYE CYGLLCRHIF YVLRMSKVFH FPKQYMDNRW SKQAISHKFV  660
ESRKAYPATT NSDYVVDATL RDIYSNVEES INHLVGDIQK LHIYRDDQLA LMEKAKLDVP  720
NPPKLNTNEA YARALGVTEP AELNILTPTD IDNKGQVIRT RLKSKLEIAT DLADKPKRKC  780
KSCGKMARHD SRNCPKKRKG LQDEDVDEDV DQYMDDSDYF L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	110	RKKKQNPDLKYFCCSREGVKPSPKDDISKKDK
2	777	799	KRKCKSCGKMARHDSRNCPKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-73	FAR1 family protein