PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003101.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 282aa    MW: 31340.2 Da    PI: 7.0757
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003101.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.4e-18128176355
                    AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            ++GVr+++ +g+WvAeIr p++   r+r++lg+f taeeAa a++ a+  l+g
  Cse_sc003101.1_g020.1 128 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFETAEEAAFAYDTAAYLLRG 176
                            8******9.**********955...5**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MSSYIQETTK GTQAFSNSSI WSDLNGSISS SSSSPLNGLP PYFLETFSQH NQPSQPFEPS  60
LPPSLTNTSR FPNLSLLLTE PKPSTSVQSG SNGYWLRAMK TQQMKYTGKG IVDTTLRKTS  120
ICSPGKLFRG VRQRHWGKWV AEIRLPRNRT RVWLGTFETA EEAAFAYDTA AYLLRGDYAH  180
LNFPNLKNEL KANSINGHTA ALLEAKLQTI SSNKKVNDQI SPPSTEITLS TMENHADYEL  240
ENEKSKKPVE AGESDVVEGV QLSRMPSLDM DMIWDAILVS DS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.16e-52ERF family protein