PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc003084.1_g060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HSF | ||||||||
Protein Properties | Length: 260aa MW: 29385.8 Da PI: 5.4409 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 80.3 | 3e-25 | 47 | 145 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSS......SEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEE CS HSF_DNA-bind 2 Flkklyeiledeelkeliswseng......nsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkh 83 F++kly+++ ++e++++isw n +sf++++++ef +kvLp + k +nf SFv QLn YgFkk++ + e++h Cse_sc003084.1_g060.1 47 FVNKLYNVVCNKETDSIISWVPNLnvsdgaKSFAIWNTDEFIDKVLPLMSKSKNFDSFVTQLNNYGFKKMSWDC---------REYAH 125 9*******************85533566679****************************************988.........57*** PP SXXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 84 ksFkkgkkellekikrkkse 103 ++F++gk +ll+++kr++++ Cse_sc003084.1_g060.1 126 EWFQEGKPHLLKNVKRRRKQ 145 ****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MEGIDVDETM VVSDISEGFS SGDEGGDGDE LLVEPMRGVR NGALPPFVNK LYNVVCNKET 60 DSIISWVPNL NVSDGAKSFA IWNTDEFIDK VLPLMSKSKN FDSFVTQLNN YGFKKMSWDC 120 REYAHEWFQE GKPHLLKNVK RRRKQTISES EKLQCEIKKL ESSSKEQYNE LNAFKSYVDN 180 TISNQKRILQ TMARAIKSTI DHHNQVRMMH GVENNDDATQ NSTLVGQQSN KTSVVGESSF 240 APSCEIQPED KSAKNTTKNN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 136 | 142 | LKNVKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54070.1 | 4e-28 | HSF family protein |