PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc003046.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Trihelix

Protein Properties

Length: 824aa MW: 95083.2 Da PI: 4.3413

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc003046.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33.9	8.3e-11	124	195	1	71
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrer.gferspkqCkekwenlnkrykkikegekkr 71 +W+++ + +L+e+ ++ +l+r++l++ +W ev++k++e ++e++ qC+ ++e l+++ykk+k+ +++ Cse_sc003046.1_g060.1 124 EWSENATFVLLEVWGDRYMQLGRRSLRGEDWVEVAEKISEMcKMEINDGQCRTRFETLKQKYKKEKAKMEGS 195 5***********************************775378*******************9877653 PP

Sequence ? help Back to Top
Protein Sequence Length: 824 aa Download sequence
MDYNSSIRSR RPIRNNNYTN NYNDYDNDND FEPPESPLAP PINNRFNYHQ HQHVNIVNDD 60 SDNSADDDDD EDDINNNNNN EYQQQYYNVG ETSTRRHQKK RRLDNLVGGY GYAARGSVNN 120 VMDEWSENAT FVLLEVWGDR YMQLGRRSLR GEDWVEVAEK ISEMCKMEIN DGQCRTRFET 180 LKQKYKKEKA KMEGSGMGMG HAYYGKWGFF KKMDMLLSPK RQHNGLPCGV DSGEYVFMNT 240 KVYLNQSNAL DEMRDSPGES EVDEDEDDEE EDEDGDGLNE EDEEGFKLLA ESVQNFGEIY 300 EKIEGRKRQQ MLELEKMRMD FQRELELQKK VILERAQAEI AKIREEDDED ANSVFRHLVE 360 KVNCGLLFAT LLTHRRVRHP PSRYITTHGL CFQIHVQYPQ NVVEAVTKAA EVMKTKIEVS 420 FRSSERRSEF STLHEEWLKS VLAMSRVDDH KLEGGDEDDV FDELFCGKTL AEFPNSIELG 480 KLGPGGYGYA PRGNVSNVMD EWSENATFVL LEVWGDRTEE VAEKISEMCK MEINDGQCRT 540 KFETLKQKYK KEMAKMEGSG MGHGYYGKWG FFKKMDMLLS PKRQHNGLPC GVDLGEYVFM 600 NTKVYLNQSN ALDEMRDSPG ESEVDEDDDE EDEDGDELNE EDEDGDELNE EDEEGFKLLA 660 ESVQNFGEIY EKIEGRKRQQ MLELEKMRMD FQRELELQKK VILERAQAEI AKIREEDDED 720 ANSLGSYVPC EMCVLSPVDI IFTRLGATDR IMTGESTFLI ECTETASVLQ SASQDSLVIL 780 DELGRETSTP ESVITSCSTS NIDFRHEKSF HIHHPFSNLI IGIE

Sequence ? help Back to Top

Protein Sequence Length: 824 aa Download sequence

MDYNSSIRSR RPIRNNNYTN NYNDYDNDND FEPPESPLAP PINNRFNYHQ HQHVNIVNDD  60
SDNSADDDDD EDDINNNNNN EYQQQYYNVG ETSTRRHQKK RRLDNLVGGY GYAARGSVNN  120
VMDEWSENAT FVLLEVWGDR YMQLGRRSLR GEDWVEVAEK ISEMCKMEIN DGQCRTRFET  180
LKQKYKKEKA KMEGSGMGMG HAYYGKWGFF KKMDMLLSPK RQHNGLPCGV DSGEYVFMNT  240
KVYLNQSNAL DEMRDSPGES EVDEDEDDEE EDEDGDGLNE EDEEGFKLLA ESVQNFGEIY  300
EKIEGRKRQQ MLELEKMRMD FQRELELQKK VILERAQAEI AKIREEDDED ANSVFRHLVE  360
KVNCGLLFAT LLTHRRVRHP PSRYITTHGL CFQIHVQYPQ NVVEAVTKAA EVMKTKIEVS  420
FRSSERRSEF STLHEEWLKS VLAMSRVDDH KLEGGDEDDV FDELFCGKTL AEFPNSIELG  480
KLGPGGYGYA PRGNVSNVMD EWSENATFVL LEVWGDRTEE VAEKISEMCK MEINDGQCRT  540
KFETLKQKYK KEMAKMEGSG MGHGYYGKWG FFKKMDMLLS PKRQHNGLPC GVDLGEYVFM  600
NTKVYLNQSN ALDEMRDSPG ESEVDEDDDE EDEDGDELNE EDEDGDELNE EDEEGFKLLA  660
ESVQNFGEIY EKIEGRKRQQ MLELEKMRMD FQRELELQKK VILERAQAEI AKIREEDDED  720
ANSLGSYVPC EMCVLSPVDI IFTRLGATDR IMTGESTFLI ECTETASVLQ SASQDSLVIL  780
DELGRETSTP ESVITSCSTS NIDFRHEKSF HIHHPFSNLI IGIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	4e-69	Trihelix family protein