PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003028.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 263aa    MW: 30623.8 Da    PI: 10.4083
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003028.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.97.8e-0969150789
                   FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek..dgkwevtkleleHnHel 89 
                            A++ GF ++k ++k+    g  ++ +f+Cs++g++++e  + ++ +r++++t+t+C  +l  k  k  ++ w +    l H H +
  Cse_sc003028.1_g010.1  69 AQSNGFLIVKGRTKTD--RGYKYSIEFKCSRHGTSAREGLE-DELQRQTSTTKTNCPFRLLAKYIKgqTNSWILRVKCLRHYHYF 150
                            8899*******98888..6667***************9999.89999999***********999988788898888889999977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MSGSPFDTQE KQIPPQKRHH HRNITTTETT TTSPQTSPTN NRNHHIITTT TTKFLDLKNV  60
LTNWVQSTAQ SNGFLIVKGR TKTDRGYKYS IEFKCSRHGT SAREGLEDEL QRQTSTTKTN  120
CPFRLLAKYI KGQTNSWILR VKCLRHYHYF VNSFHGFPQA MRLKEHELVL VEQLTKHKVA  180
PRIILSSLKE SDPDNVHNIK TIYNAQNKIR GAIRGDMTPI QVLLAHLRRQ SYTYYPRIND  240
RTNELEEIFF VHPTSYALWT TFP