PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc003004.1_g060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | C3H | ||||||||
Protein Properties | Length: 171aa MW: 18971.1 Da PI: 9.6544 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 25.8 | 1.8e-08 | 118 | 141 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 kte C++f r G+C+ G++C+F+H+ Cse_sc003004.1_g060.1 118 KTEVCHNFGR-GFCRWGAQCRFIHD 141 9*********.*************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MGDQKTDTYF SKIESIITLF NNLGSTMSDD DVVTYTINGL SDKYANLATV IAHKDPFLDL 60 ATMRSMVTTE EIRLKSKAPI LSSNMTSSAR HVLLTKTVPS RSQDSRTTRD RDSRNNMKTE 120 VCHNFGRGFC RWGAQCRFIH DSSRTGTSRN SNSGNSQSNS RNSITSAPGQ C |