PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002986.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 288aa    MW: 32183.8 Da    PI: 8.5543
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002986.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-183888155
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           +++ GVr+++ +g+WvAeI+  +   ++ r +lg+f+taeeAa+a+++a+  l+g
  Cse_sc002986.1_g020.1 38 TKFVGVRQRP-SGKWVAEIKNTT---QKIRMWLGTFDTAEEAARAYDEAAYLLRG 88
                           699*******.7******99932...36**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MELNFQNNNN YGFSSSSSNS LAKKGRYSNT NGRNSNRTKF VGVRQRPSGK WVAEIKNTTQ  60
KIRMWLGTFD TAEEAARAYD EAAYLLRGAN ARTNFIHHVP INSALSLKIR NLLNHKKCLR  120
QNSINSINSI NKTNTNTIKT QIRTPDVPKR ASVSCTVQVN PAKSETFSSG YQGNEVFENG  180
YKPDLTNCLS SVETGDSSVG SCYELDSSVP FNIGAEFDGF GLGSISKKND QDLSTSDFER  240
MKVERQISAS LYAMNGVNEY WENVLHDCPD NTSYWDLPML SQMFCPIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-40ERF family protein