PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002959.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 367aa    MW: 40608.4 Da    PI: 6.4101
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002959.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.4e-21178227255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                            +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  Cse_sc002959.1_g070.1 178 KYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 227
                            8********.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MCFIKVANSK DSSDYASIDR DVDDSEGGSA PTQPPRSPSD MFASEYSMSG ELSAMVTALT  60
RVVSGHDQHG HGHGSSGVGF RGEMYSMDSP SSAYSSSSSG TFSGQKRIRD HKESVSDQLQ  120
EQFQQRYYGG LADFRGGESS SSRVKEEEVT APPPGATSTA DVPTTTTIAQ NPPVERRKYR  180
GVRQRPWGKW AAEIRDPHKA ARVWLGTFDT AEAAARAYDE AALRFRGNRA KLNFPENVRL  240
APQQQQQIRP PTQLNIRQQP APPQPFQPPP DAATARDYWR YSQLLQPNTA FNQQLPRNNL  300
FQQMFNTQTS SFSSSSPAIN YPLFFPNQPS GYLDFRRPGG ENQDDQDDHP VGPPSWPGSD  360
QFPPPSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.11e-22ERF family protein