PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002957.1_g080.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 433aa MW: 51074.9 Da PI: 10.0508

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002957.1_g080.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.1	2.4e-07	155	229	7	83
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 A+++GF ++k ++k+ +g ++ +f Cs++g+++++ + ++ +r+++ +++C +l vk k + w ++ ++l Cse_sc002957.1_g080.1 155 AESIGFLIVKGRTKTD--KGYKYSIEFLCSRHGTSARKGLE-DELERQTSIAKINCPFRLLVKFIKgRTGWILKAMRL 229 899******98888..6777***********9999.888899999**********999889999888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MNRNRRDKRF SLGNQRRGCD LETRSKFTMK QFAIVKIFNL QAYLRYKGYH IHNSQFTVHN 60 FIPQRSNHSL KNTNNRPQEY QQQEYHRNHH EPWLKNTNNN RPQEYQQQEY HRNHHEPWLK 120 NTNNNRSQEY QQQHQPKARV FDTEVALTDW VQSTAESIGF LIVKGRTKTD KGYKYSIEFL 180 CSRHGTSARK GLEDELERQT SIAKINCPFR LLVKFIKGRT GWILKAMRLK ESELVLVKQL 240 TKQHVAPRII LSSLKESDPN NVSGIKTVYN AQDNIRRASR GDLTPIQLLL VHLQRQGYTY 300 YPRMQQENPY LCRCRRGFII ERTSHKPKTC GLKYYACPLS KPGTEDYGCR YFMWNEIFQQ 360 KYFGQASSST QCPNCETKDK TINMLLAQNN LLKARIKTLE TSLELARNPV DYACQSSGIL 420 YELIDDTNNL HVE

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MNRNRRDKRF SLGNQRRGCD LETRSKFTMK QFAIVKIFNL QAYLRYKGYH IHNSQFTVHN  60
FIPQRSNHSL KNTNNRPQEY QQQEYHRNHH EPWLKNTNNN RPQEYQQQEY HRNHHEPWLK  120
NTNNNRSQEY QQQHQPKARV FDTEVALTDW VQSTAESIGF LIVKGRTKTD KGYKYSIEFL  180
CSRHGTSARK GLEDELERQT SIAKINCPFR LLVKFIKGRT GWILKAMRLK ESELVLVKQL  240
TKQHVAPRII LSSLKESDPN NVSGIKTVYN AQDNIRRASR GDLTPIQLLL VHLQRQGYTY  300
YPRMQQENPY LCRCRRGFII ERTSHKPKTC GLKYYACPLS KPGTEDYGCR YFMWNEIFQQ  360
KYFGQASSST QCPNCETKDK TINMLLAQNN LLKARIKTLE TSLELARNPV DYACQSSGIL  420
YELIDDTNNL HVE