PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002933.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 734aa MW: 84331.5 Da PI: 7.0095

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002933.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84	2.3e-26	28	114	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 ++Y+eYAk+vGF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk++ dgkw+++++++eHnHe Cse_sc002933.1_g060.1 28 EYYKEYAKSVGFGTAKLSSRRSRSSKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRKPDGKWYIHSFVKEHNHE 111 69*************************************999877....9********************************** PP FAR1 89 lap 91 l p Cse_sc002933.1_g060.1 112 LIP 114 975 PP

Sequence ? help Back to Top
Protein Sequence Length: 734 aa Download sequence
MDVNAVPEVT KSEPEEPIEF DSNDLAYEYY KEYAKSVGFG TAKLSSRRSR SSKEFIDAKF 60 SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRKPDGKWY IHSFVKEHNH ELIPSQSHFF 120 RSHRGSDPHK TDAKARRKTI LASMSKQYGV YQCNGLDNFI RNQNDRGRSL TLEEGDAQLL 180 EHFVTMQEEN PKFFYAVDLN EEHQLRNVFW VDAKGIDDYT NFSDVVSFDT TYFMNKYKIP 240 LVLFIGVNQH CQPTLLGCAL IADETFFTFV WLFQTWYLAM GSRAPNVILS DQGNYLEAAI 300 ASVFPDTRHC YCLWYVLEKF SSQLDYMNPW HDTFMAKFDK CIHKSWTEEQ FDKRWMKLVN 360 KFNLGEDTWF QSLYQDRRLW APTFIKNVSL AGLSTRSRSE SLNSFFEKYV QVDTSLRVFL 420 ERYKVIVEDM YEEQAKAYFD AWHDTPEVKS PSPFEKQLSS VYTHAIFKKF QVEVLGAAAC 480 HLRVEKEDGS SITYVVKDFE TNQDYMVEWN ETQLDICCSC RSFEFRGYLC RHAIVVLQMS 540 GVFTIPVKYV LQRWTNAAAS RIPLSEKLES VQTKIRRLND LCRRAIIVGE EGSISQESYK 600 IALDAIKDAM TQCSNVNNSA ENEEEQVVIG VPVEPMANLN VNKGVKRAAS GKGKSNNDGI 660 AVTKDKVPAQ AEAVNIGINA SFHQMDLPNT RLLQLHNMMP PHLQGVVPAM FHNVASTQYH 720 NVASAQLQNS RLPH

Sequence ? help Back to Top

Protein Sequence Length: 734 aa Download sequence

MDVNAVPEVT KSEPEEPIEF DSNDLAYEYY KEYAKSVGFG TAKLSSRRSR SSKEFIDAKF  60
SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRKPDGKWY IHSFVKEHNH ELIPSQSHFF  120
RSHRGSDPHK TDAKARRKTI LASMSKQYGV YQCNGLDNFI RNQNDRGRSL TLEEGDAQLL  180
EHFVTMQEEN PKFFYAVDLN EEHQLRNVFW VDAKGIDDYT NFSDVVSFDT TYFMNKYKIP  240
LVLFIGVNQH CQPTLLGCAL IADETFFTFV WLFQTWYLAM GSRAPNVILS DQGNYLEAAI  300
ASVFPDTRHC YCLWYVLEKF SSQLDYMNPW HDTFMAKFDK CIHKSWTEEQ FDKRWMKLVN  360
KFNLGEDTWF QSLYQDRRLW APTFIKNVSL AGLSTRSRSE SLNSFFEKYV QVDTSLRVFL  420
ERYKVIVEDM YEEQAKAYFD AWHDTPEVKS PSPFEKQLSS VYTHAIFKKF QVEVLGAAAC  480
HLRVEKEDGS SITYVVKDFE TNQDYMVEWN ETQLDICCSC RSFEFRGYLC RHAIVVLQMS  540
GVFTIPVKYV LQRWTNAAAS RIPLSEKLES VQTKIRRLND LCRRAIIVGE EGSISQESYK  600
IALDAIKDAM TQCSNVNNSA ENEEEQVVIG VPVEPMANLN VNKGVKRAAS GKGKSNNDGI  660
AVTKDKVPAQ AEAVNIGINA SFHQMDLPNT RLLQLHNMMP PHLQGVVPAM FHNVASTQYH  720
NVASAQLQNS RLPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	0.0	FAR1 family protein