PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002933.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 450aa MW: 48795.8 Da PI: 7.1527

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002933.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.2	1.1e-11	256	298	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L Cse_sc002933.1_g030.1 256 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 298 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MLSRVNSVSW MNDDENNQTN NNNNNELKSL LDDVQLENNN TNNISTQNNW FLTQVDSTTS 60 SCSPNSSFQN HPFYIPPKPN TNTISSLFNP NHNPLDETFN MLPNFCDLGS QTQTQMGITN 120 LNPSLHFSDT LLAQMPGTGF GSPGYPFSEN GSTAGLMLNR SKMLKPLEGF TPTGSTPPTL 180 FQKRALKRNS GEISGAGEFS GAGMLAKGKS GSWDEVSLDG SGLNYDSDEF TAVANGGNGG 240 GGGKGKKKGL PAKNLMAERR RRKKLNDRLY MLRSVVPKIS KMDRASILGD AIEYLKELLQ 300 KINDLNHELE ATPASSSLTP TAAATMAAGT PGFYPLTPTP TSLPTRIKEE LCATTMPSPT 360 GQQPARVEVR QREGRAVNIH MFCSRRPGLL LSTMRALDNL GLDIQQAVIS CFNGFALDIF 420 RAEQCKEGQD VHPDQVKAAL LESAGYHGVA

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MLSRVNSVSW MNDDENNQTN NNNNNELKSL LDDVQLENNN TNNISTQNNW FLTQVDSTTS  60
SCSPNSSFQN HPFYIPPKPN TNTISSLFNP NHNPLDETFN MLPNFCDLGS QTQTQMGITN  120
LNPSLHFSDT LLAQMPGTGF GSPGYPFSEN GSTAGLMLNR SKMLKPLEGF TPTGSTPPTL  180
FQKRALKRNS GEISGAGEFS GAGMLAKGKS GSWDEVSLDG SGLNYDSDEF TAVANGGNGG  240
GGGKGKKKGL PAKNLMAERR RRKKLNDRLY MLRSVVPKIS KMDRASILGD AIEYLKELLQ  300
KINDLNHELE ATPASSSLTP TAAATMAAGT PGFYPLTPTP TSLPTRIKEE LCATTMPSPT  360
GQQPARVEVR QREGRAVNIH MFCSRRPGLL LSTMRALDNL GLDIQQAVIS CFNGFALDIF  420
RAEQCKEGQD VHPDQVKAAL LESAGYHGVA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	246	264	KKKGLPAKNLMAERRRRKK
2	258	265	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-108	bHLH family protein