PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002883.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 874aa    MW: 99715.3 Da    PI: 8.3528
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002883.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.93.1e-10416461146
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                            r  WT +E+++ +d++   G  +W  Ia+++ ++Rt++qc sr+q 
  Cse_sc002883.1_g070.1 416 REQWTNDEEKKMLDCFSNRGFSNWIDIAKELKTNRTPYQCLSRFQR 461
                            679*****************************************96 PP
2Myb_DNA-binding48.52e-15471513346
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                             WT+ Ede l +av+ +G  +W +Ia+ ++ gRt+ qc +rw k
  Cse_sc002883.1_g070.1 471 EWTPTEDEELRKAVANYGETNWQLIASILP-GRTGTQCSNRWKK 513
                            7*****************************.***********98 PP
3Myb_DNA-binding30.86.6e-10523567247
                            SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            grW  +Ed++l+ av+++G ++W++  + ++ gRt +qc +rw + 
  Cse_sc002883.1_g070.1 523 GRWDSDEDKRLKIAVRLFGAKNWHKKTKFVP-GRTQEQCGERWANC 567
                            89***********************999***.***********885 PP
4Myb_DNA-binding45.81.4e-14575619248
                            SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            ++WT+eEd +l+ av+++    W+++a++++  Rt+ qc+ rw  +l
  Cse_sc002883.1_g070.1 575 DKWTEEEDMKLKAAVEEHNYS-WARVAACIP-QRTDSQCRRRWKVLL 619
                            69****************988.*********.***********9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 874 aa     Download sequence    
MSDTETDSDD NEFQQDIQAL RRACSIKTDD VIPKSSSSTV TVDDDDDEDM VLLKDIKKCL  60
SVRNNGKDDD EDEEVLMKPL NTILPNDCDI IDDEDYGGDF ETLRAILRRF SQYNDSTSNG  120
MESSVQRSEK QVGATNIIDL GKESSPNFFV TRINNRQGFP DSVDGRTANN HISSNVTSAA  180
NVSEGHELVP VGDCGFPASA QAFVEAIKKN RTYQKFLRDK LIQVEARLEE NKKLRERVKF  240
LKGFQVDCRK RTGQALSHKK DPVFQLISVP KPRANASKVS PYTADASIKD KSTLPINQGP  300
AQNPQVAIFN DAMLKYPFSL SREPWSKEDT KDLKKGIKQQ IQEMMMQNLF SAEDPHSSNL  360
DRMIARIKKR EITPEEIRSF LPKVNWELLA SMYLTGRSGP ECESRWRNCE DPLINREQWT  420
NDEEKKMLDC FSNRGFSNWI DIAKELKTNR TPYQCLSRFQ RSLNPFILNN EWTPTEDEEL  480
RKAVANYGET NWQLIASILP GRTGTQCSNR WKKSLNPLRK RVGRWDSDED KRLKIAVRLF  540
GAKNWHKKTK FVPGRTQEQC GERWANCLDP SLKMDKWTEE EDMKLKAAVE EHNYSWARVA  600
ACIPQRTDSQ CRRRWKVLLP HQVPMLKAAK EIEKRCFVSN FVDREEERPQ LTYKDFNKPL  660
LLESGPKANE DSITSKDKKR RSVGKDRPRR AKKVAHTGKA RKLVDEDDVE DNDGQADITS  720
NGEGHNTCDG VDREVPISKK KSTEESVVCG SASRDIAEYE AILTNDISKH VSFSVSRSSR  780
VPLMIKDVPA RDERCFSQVI LKSMSGDGPQ ATTLKKCKAS CKLPNGTHSR GPKRNTDIKN  840
NIRKREAVDG LEDEETFANF LSKLKKRRPD HLGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-167MYB family protein