PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc002861.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 139aa MW: 15868.3 Da PI: 8.5085 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.7 | 0.0016 | 79 | 101 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cg+ F L H+r+H Cse_sc002861.1_g050.1 79 HECAICGQEFAIGQALGGHMRRH 101 78*******************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 139 aa Download sequence |
MTVKRMLEDD TEIEQMAMAN CLMLLSRVGK TEPDRLFHCK TCNKEFRSFQ ALGGHRASHK 60 RPKLNDFLSQ SSPPKPKTHE CAICGQEFAI GQALGGHMRR HRDEVTGKTI VTKKENVFLD 120 LDLNLTPYEN DLKLWPIVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G28710.1 | 1e-35 | C2H2 family protein |