PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc002837.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | C2H2 | ||||||||
Protein Properties | Length: 264aa MW: 30237 Da PI: 8.138 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 21 | 8.8e-07 | 116 | 135 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C k+F+r+ nL+ H+ Cse_sc002837.1_g050.1 116 FSCHICRKTFNRHNNLQMHM 135 89*****************9 PP | |||||||
2 | zf-C2H2 | 17.6 | 1.1e-05 | 192 | 214 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +CgksF k + ++H +++ Cse_sc002837.1_g050.1 192 FSCRKCGKSFAVKGDWRTHEKNC 214 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MDFFASSSKP NIPVSEPFDF FKTKDEESFK TLPFFSFLSL EPCKLEKNSN TCNKVEDDDN 60 VTVALHIGLP NQNDNTTAVD DNSYSDNNNI MVANMPANVE YWIPNRSQIL AGFTHFSCHI 120 CRKTFNRHNN LQMHMWGHGS EYRKGAESLR GTQPRVMIGV PCYCCEEECK NNINHPRTLQ 180 THYKRKHGTK QFSCRKCGKS FAVKGDWRTH EKNCGKRWLC VCGSDFKHKR SLKDHIMSFG 240 AGHAPAQPSF QTVELREATT NDIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34790.1 | 3e-91 | C2H2 family protein |