PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002827.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 422aa    MW: 48184.6 Da    PI: 5.8632
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002827.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS309.67e-95444213374
                   GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 
                            +lL ecA+a+s++d +++++lL+ l+el+sp+gd  q+la yf++AL  + ++s++++yk+l + +++++  +++ +    f+evsP+
  Cse_sc002827.1_g070.1  44 KLLRECARAISEKDSAKINHLLWMLNELSSPYGDCDQKLAYYFLQALFCKATESGQRCYKTLVSVADKSHCFDSARKLILKFQEVSPW 131
                            7999**********************************************************9999985554444445455******* PP

                   GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
                             +f+h++ N aIlea+ege+++HiiD++ + ++QWp+Ll+a+a+R++++psl++T+v+  ++  +  ++e+ +r++kfA+ +gvpfef
  Cse_sc002827.1_g070.1 132 TTFGHVASNGAILEAFEGETKLHIIDISNTLCTQWPTLLEAIATRSDETPSLKLTVVVT-ATMVRSVMKEITQRMEKFARLMGVPFEF 218
                            ***********************************************************.557999********************** PP

                   GRAS 179 nvl..vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerfleale 262
                            nv+    k l +l+ eeL v+ +Ea+aVn++ +l r+      +e+ r ++++l+ sl+P+vv++ve+ead   ++++F++ f e+l+
  Cse_sc002827.1_g070.1 219 NVIngSNKPLGQLTKEELGVQDDEAIAVNCICALRRVE-----VEE-RGDIIRLFSSLKPRVVTIVEEEADFtsSRSDFVKCFEECLR 300
                            ***766779***************************97.....444.889*******************999545669********** PP

                   GRAS 263 yysalfdsleaklpreseerikvErellgreivnvvacegaerr.....erhetlekWrerleeaGFkpvplsekaakqaklllrkvk 345
                            yy+  f++le+++ ++s+er ++Ere  +r+iv v++c  ++ +     er+e+ ++W erl+e  F+ v++s+++++++++llr++k
  Cse_sc002827.1_g070.1 301 YYTLYFEMLEESFTTTSNERLMLERE-CSRSIVRVLSCDDKQNIgsgdcERREKGKQWCERLKEL-FSHVSFSDDVVDDVRALLRRYK 386
                            **************************.89*********987753333339*************98.********************** PP

                   GRAS 346 sdgyrveee.......sgslvlgWkdrpLvsvSaWr 374
                              g+++ ++       +  ++l Wkd+ +v++SaW+
  Cse_sc002827.1_g070.1 387 -TGWSLAHDqtksntaDSGIYLAWKDEHVVWASAWK 421
                            .78888855556666577888**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MERTHLSPYT NHHQTSTTKR PISQTYSDSG GSDTCPDEDK WASKLLRECA RAISEKDSAK  60
INHLLWMLNE LSSPYGDCDQ KLAYYFLQAL FCKATESGQR CYKTLVSVAD KSHCFDSARK  120
LILKFQEVSP WTTFGHVASN GAILEAFEGE TKLHIIDISN TLCTQWPTLL EAIATRSDET  180
PSLKLTVVVT ATMVRSVMKE ITQRMEKFAR LMGVPFEFNV INGSNKPLGQ LTKEELGVQD  240
DEAIAVNCIC ALRRVEVEER GDIIRLFSSL KPRVVTIVEE EADFTSSRSD FVKCFEECLR  300
YYTLYFEMLE ESFTTTSNER LMLERECSRS IVRVLSCDDK QNIGSGDCER REKGKQWCER  360
LKELFSHVSF SDDVVDDVRA LLRRYKTGWS LAHDQTKSNT ADSGIYLAWK DEHVVWASAW  420
KP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-132GRAS family protein