PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc002812.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 220aa MW: 25844.7 Da PI: 9.172 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.1 | 1.7e-07 | 25 | 70 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 WT+e + + a + + ++ +W+ +a+ ++ g++++++++ + Cse_sc002812.1_g010.1 25 EWTKEQNKWFESALAIFDTEtpdRWSNVAAFVP-GKSEYEVREQYEE 70 7********************************.********99976 PP | |||||||
2 | Myb_DNA-binding | 44 | 5e-14 | 123 | 167 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + + +G+g+W+ I+r + ++t+ q+ s+ qky Cse_sc002812.1_g010.1 123 PWTEEEHRRFLMGLQVHGKGDWRNISRNFVVTKTPTQVASHAQKY 167 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
METSSYPSLH VLSSNHMMQD RKSSEWTKEQ NKWFESALAI FDTETPDRWS NVAAFVPGKS 60 EYEVREQYEE LKADINNIEA GLVEVPGYMT FKSEFVQDHG FHTFGNRLLR SRSFDHERRK 120 GVPWTEEEHR RFLMGLQVHG KGDWRNISRN FVVTKTPTQV ASHAQKYYAR QHSDGKEKRR 180 PSIHDITTFN LPRTPPDNGT NMRVYNSGHY FQPTRYQVQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 6e-75 | MYB family protein |