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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc002810.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NF-YB | ||||||||
Protein Properties | Length: 234aa MW: 25404.7 Da PI: 9.5125 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 170.7 | 1.6e-53 | 82 | 175 | 1 | 94 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylk 88 vreqd+flPia +srimkk +Pan+ki+kdaketvqecvsefisf+tseasdkcqrekrkt+ngddllwa+atlGfedy+eplk yl+ Cse_sc002810.1_g010.1 82 VREQDKFLPIAIISRIMKKGVPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTVNGDDLLWAMATLGFEDYIEPLKSYLS 169 69************************************************************************************** PP NF-YB 89 kyrele 94 +yre + Cse_sc002810.1_g010.1 170 RYREGD 175 ***965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MGHGTIAGML KVQKCTKLTN GIDKTQTFAS SSSDLLPRTP AKFYKISISQ ISFGVMMAEG 60 PGSPGGGSHE SGGDQSPRSS NVREQDKFLP IAIISRIMKK GVPANGKIAK DAKETVQECV 120 SEFISFITSE ASDKCQREKR KTVNGDDLLW AMATLGFEDY IEPLKSYLSR YREGDAKGSG 180 KGHEGSSRKD GVQPSLNNAQ VGHQIPYPQS LTYANSQAHT QHMMVPRVSS YPPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37060.1 | 1e-75 | NF-YB family protein |