PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002797.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 484aa MW: 53400.4 Da PI: 6.4115

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002797.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19	2.6e-06	266	297	20	55
HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 20 feeLrellPkaskapskKlsKaeiLekAveYIksLq 55 f+ Lr ++P+ ++K +Ka+ L +++eYI+ Lq Cse_sc002797.1_g060.1 266 FSMLRGIIPHG----DQKRDKASFLLEVIEYIQFLQ 297 788*****7....7*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MELSQPRPRG ETGAKPTHDF LSLYSPAHQD PSPTIPGSYL KTHNFLQPLE QVGKNVCEEV 60 EYIKKSFPPS PPTVGEHILP GGMGTYSITH IPHINQTQKV SKPEGIVISA AQSSSSNNND 120 ENSNCSSYTG SGFTLWEESN VNKGKTRKEN NTATNRHTMR DGGMKFGVPW MTSMEQPSKS 180 SSINNQPSTT FSSLSSSHRS SAPKSQYFVD MKSGRNFQEV EDIDKGFVVY RLKLALQILI 240 RSLTAHALST LLQNSVEEAK LMTGIFSMLR GIIPHGDQKR DKASFLLEVI EYIQFLQEKV 300 HKYEDSSQGW TNEVNEPLKT IPINDFIHQP EIPTRQNLLD SNMISHDATN ETSQHPQSTN 360 KPCASAAASY EQISTPDTAT TASQAQELII EGGTISISTI YSQGLASALT QALNSSGVDL 420 SHANISVQID LGKRSNTNRL ESSPPDLKEN EAHCVDQSMA RSRLASTWEE ESDEGFKRLK 480 TSRN

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MELSQPRPRG ETGAKPTHDF LSLYSPAHQD PSPTIPGSYL KTHNFLQPLE QVGKNVCEEV  60
EYIKKSFPPS PPTVGEHILP GGMGTYSITH IPHINQTQKV SKPEGIVISA AQSSSSNNND  120
ENSNCSSYTG SGFTLWEESN VNKGKTRKEN NTATNRHTMR DGGMKFGVPW MTSMEQPSKS  180
SSINNQPSTT FSSLSSSHRS SAPKSQYFVD MKSGRNFQEV EDIDKGFVVY RLKLALQILI  240
RSLTAHALST LLQNSVEEAK LMTGIFSMLR GIIPHGDQKR DKASFLLEVI EYIQFLQEKV  300
HKYEDSSQGW TNEVNEPLKT IPINDFIHQP EIPTRQNLLD SNMISHDATN ETSQHPQSTN  360
KPCASAAASY EQISTPDTAT TASQAQELII EGGTISISTI YSQGLASALT QALNSSGVDL  420
SHANISVQID LGKRSNTNRL ESSPPDLKEN EAHCVDQSMA RSRLASTWEE ESDEGFKRLK  480
TSRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	5e-48	bHLH family protein