PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002783.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

ARR-B

Protein Properties

Length: 405aa MW: 46186.7 Da PI: 6.3817

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002783.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	79	5.7e-25	216	269	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ Wt+eL e+Fv+av+ L G+++A+Pk+ilelm+v+gL +e+v+SHLQkYRl Cse_sc002783.1_g060.1 216 KNRIAWTTELREKFVRAVKIL-GIQNAVPKKILELMNVPGLRRENVASHLQKYRL 269 68*****************.9*****************************8 PP
2	Myb_DNA-binding	37.3	6.4e-12	220	268	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 +WTte+ e++v+avk lG +k+I + m+ g+ ++++ s++qky+ Cse_sc002783.1_g060.1 220 AWTTELREKFVRAVKILGIQnaVPKKILELMNvPGLRRENVASHLQKYR 268 7****************999************************7 PP
3	Response_reg	31.7	7.7e-12	26	98	2	75
EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHESEEEEESSC.TTSEHHHHHHHH.HHHTTTSEEE CS Response_reg 2 livdDeplvrellrqalekegyeevaeaddgeealellkekdpDlillDiem.pgmdGlellkei.reeepklpii 75 l+vd + + + l+++l+ +y +v++++ + ealel+ke+++D++++ + p++dG+e+l+ i re lp++ Cse_sc002783.1_g060.1 26 LVVDNNGTSLLYLTTMLTIYHY-QVTTCSLPNEALELIKENKFDIVITEVHFsPDIDGVEFLEIIiRETR--LPVV 98 89******************.**********************886266********56544..6666 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MSSSKNSPMK PLSLEDIFNP HGLKALVVDN NGTSLLYLTT MLTIYHYQVT TCSLPNEALE 60 LIKENKFDIV ITEVHFSPDI DGVEFLEIII RETRLPVVKL RRLNKRRPEG LDTWMYKNEA 120 GRSQYERIDT IRECIVKGAC AYIPKPAKKE VIQVLWQHVA RAHKEMLREK LMKPIDLLEI 180 NEPSLISSAE DKEFCGSSSS DGVPMEDVQN KNQPKKNRIA WTTELREKFV RAVKILGIQN 240 AVPKKILELM NVPGLRRENV ASHLQKYRLN LRKLSRNMPQ SLTEKSFSTH VSSNACSPVF 300 EDNNSFISTQ PITETQEHFT VQESINHVSS GAYIPYNDSF ISTPPITEMH HPFTVQDSSI 360 QDGAYRPEFE PDNGPVIDPN DFLNTDELLQ LDPIRLASCD PNHTF

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MSSSKNSPMK PLSLEDIFNP HGLKALVVDN NGTSLLYLTT MLTIYHYQVT TCSLPNEALE  60
LIKENKFDIV ITEVHFSPDI DGVEFLEIII RETRLPVVKL RRLNKRRPEG LDTWMYKNEA  120
GRSQYERIDT IRECIVKGAC AYIPKPAKKE VIQVLWQHVA RAHKEMLREK LMKPIDLLEI  180
NEPSLISSAE DKEFCGSSSS DGVPMEDVQN KNQPKKNRIA WTTELREKFV RAVKILGIQN  240
AVPKKILELM NVPGLRRENV ASHLQKYRLN LRKLSRNMPQ SLTEKSFSTH VSSNACSPVF  300
EDNNSFISTQ PITETQEHFT VQESINHVSS GAYIPYNDSF ISTPPITEMH HPFTVQDSSI  360
QDGAYRPEFE PDNGPVIDPN DFLNTDELLQ LDPIRLASCD PNHTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01760.1	2e-42	ARR-B family protein