PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc002782.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | Nin-like | ||||||||
Protein Properties | Length: 177aa MW: 20762.7 Da PI: 9.7888 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 66.3 | 4.7e-21 | 4 | 48 | 6 | 50 |
RWP-RK 6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 + e +++y+++pi++AAk+ +++ T+ K++CR++GI+RWP+Rk++ Cse_sc002782.1_g020.1 4 TREIIAQYYYMPIAKAAKKFNIGITIFKKRCRELGIQRWPYRKLT 48 66889**************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MAFTREIIAQ YYYMPIAKAA KKFNIGITIF KKRCRELGIQ RWPYRKLTRA KVDGNTQEII 60 TRIQEEKKRE EENLDLEFTK STKRLRQFYF KSKYKRRKSM SLILSLTNQP TTSVATQFQY 120 SSESSSAEHE NIEDGSWAED AEVPSLSGIL HKSLVIHLET IVSQDERIQS YCGKHQE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66990.1 | 2e-30 | Nin-like family protein |