PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002781.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 286aa    MW: 32739.4 Da    PI: 5.1425
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002781.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-18105154255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            +++GVr++  +grW+AeIrdp++   r+r++lg+++taeeAa  +++ + +l+g
  Cse_sc002781.1_g030.1 105 KFRGVRRRQ-WGRWAAEIRDPTT---RTRVWLGTYDTAEEAALVYDRRAIELRG 154
                            89****887.**********976...5********************9999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MDHQCSPKFR VTRNITTKLQ QSHMDSPKVV TISVTDCDAT DSSGDENNHE PGRRSVKRYV  60
SVIKLERNCC GTTNMTRNGV DSDKKRLIRR KKGTGTGEGL ENVQKFRGVR RRQWGRWAAE  120
IRDPTTRTRV WLGTYDTAEE AALVYDRRAI ELRGSQAQTN FLKPPAAVQP VITSISVSDQ  180
SMNNHDLRDP SSPTSVLRVC NAEEALELQT PLEPKQIEPF DNNPFSNEYL HYESNFENDF  240
FDFRIPSPMI LEEFNLLERN EEVSSGILSE LDDDVESWMK DVDSFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-38ERF family protein