PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002745.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 701aa MW: 81033 Da PI: 7.5539

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002745.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	33.7	1.2e-10	94	161	1	71
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkke 71 +fY Y+k++GF v k++s+ks +++ ++ t C++ k+ +++k+ + ++r+ t+t+C a++ v+ Cse_sc002745.1_g010.1 94 NFYAMYGKNMGFGVFKRSSQKSLNDEVTKYVTVACNQAQKSISKSKN---TLNPRPITKTNCGARVCVSGG 161 6*******************9999999999999999888877...99*************99865 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MSKAPNISSY QSDESSYISS HLHDYGDDDL SKTTKNCCVD LENDANCEIL NEEKGECHEE 60 VYAQHNYNMN VNHDEGVEEP KIGMTFDTIE ELTNFYAMYG KNMGFGVFKR SSQKSLNDEV 120 TKYVTVACNQ AQKSISKSKN TLNPRPITKT NCGARVCVSG GGGMKIYHLR KKDCRKYVDK 180 VKRLKFGEGD AEAIQGYFMK VQSTDREFFY AWELNEENRL KSLFWADARC RAAYEEFGDV 240 ITFDTTYLTN QYEMPMAHFV GVNHHGQSVL LGCGLISNED TKTFTWLFKS WLTCMSGRAP 300 NAIITDQDQA MKNAIEIVFP DARHMLCLWH IMKKLPEKFG KHKKYKSIKY KLKKVVYDSL 360 TSTEFDESWN IMLETYKLEN NKWLKDLYVE RHRWWNNTKN ALRDRVEKEN IEDFNSYNSW 420 YPLVTRYAME EQMKNVLTNA KFKEFTEELT GKMYCVIGSL KSQNEYLEYD VLEDIIDNGN 480 IIKKQFVVWF KKGDSPEECD IRCMCRLFEF KGMLCRHALT VLINENIYLV PNKYILRRWR 540 KDVKRRHTKV KVNYSNWVVS DVGRRYDKMC NAFSEVADLA SELDEKCSLV LDLVNDLKSE 600 IMGGKTSTSS LRCTPRMSAS TKDKDKIGDP AKVNGKGRPA DFDYIGAEDN ETTKKRSKKD 660 EEVLRNVQMQ QSSYLNSLNG AVNSPNTTVS PPTTTLDPAF V

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MSKAPNISSY QSDESSYISS HLHDYGDDDL SKTTKNCCVD LENDANCEIL NEEKGECHEE  60
VYAQHNYNMN VNHDEGVEEP KIGMTFDTIE ELTNFYAMYG KNMGFGVFKR SSQKSLNDEV  120
TKYVTVACNQ AQKSISKSKN TLNPRPITKT NCGARVCVSG GGGMKIYHLR KKDCRKYVDK  180
VKRLKFGEGD AEAIQGYFMK VQSTDREFFY AWELNEENRL KSLFWADARC RAAYEEFGDV  240
ITFDTTYLTN QYEMPMAHFV GVNHHGQSVL LGCGLISNED TKTFTWLFKS WLTCMSGRAP  300
NAIITDQDQA MKNAIEIVFP DARHMLCLWH IMKKLPEKFG KHKKYKSIKY KLKKVVYDSL  360
TSTEFDESWN IMLETYKLEN NKWLKDLYVE RHRWWNNTKN ALRDRVEKEN IEDFNSYNSW  420
YPLVTRYAME EQMKNVLTNA KFKEFTEELT GKMYCVIGSL KSQNEYLEYD VLEDIIDNGN  480
IIKKQFVVWF KKGDSPEECD IRCMCRLFEF KGMLCRHALT VLINENIYLV PNKYILRRWR  540
KDVKRRHTKV KVNYSNWVVS DVGRRYDKMC NAFSEVADLA SELDEKCSLV LDLVNDLKSE  600
IMGGKTSTSS LRCTPRMSAS TKDKDKIGDP AKVNGKGRPA DFDYIGAEDN ETTKKRSKKD  660
EEVLRNVQMQ QSSYLNSLNG AVNSPNTTVS PPTTTLDPAF V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	4e-77	FAR1 family protein