PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002732.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ZF-HD
Protein Properties Length: 309aa    MW: 33441 Da    PI: 7.2381
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002732.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer107.29.8e-3455111459
            ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                            + YkeClkNhAa++G+ha+DGCgEfmps++++ +++++l+CaACgCHRnFHRre+++
  Cse_sc002732.1_g030.1  55 ISYKECLKNHAATIGSHALDGCGEFMPSPSHTpSQPTSLTCAACGCHRNFHRREPTT 111
                            78*****************************99********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MDLKHTTPTT VVATTTADSP DTDGETPLHS QLITPFSPYP TNTKHHHAPP PTVVISYKEC  60
LKNHAATIGS HALDGCGEFM PSPSHTPSQP TSLTCAACGC HRNFHRREPT TTTTNFLDFH  120
HASVPHVMLT LTSGDHHHVA TPGTPAAIKM ENYPNGRKRF RTKFSQEQKE KMNVFAEKIG  180
WKMQRCDDKM VMDFCNGIGI RRGIFKVWMH NNKNTFGNKK DNKDFVTMSP TTGNGGGMDT  240
MGDDGKRVDG VYSNGDHGHV VTSDHSHEDA NVNGGHNSTT SCDHQENGSG GGGGDGCLLV  300
SNNGSSSSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.11e-51ZF-HD family protein