PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002651.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YA
Protein Properties Length: 281aa    MW: 31506 Da    PI: 6.9096
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002651.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.34.5e-32145201158
              CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                            +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR R+sgGrF
  Cse_sc002651.1_g050.1 145 QEPVYVNAKQYHAILRRRQSRAKAELEKKL-IKDRKPYLHESRHQHAMRRMRSSGGRF 201
                            69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MATTAMRRAN SGDSTSQEQS LDKDSQSDEV LSEEEDDVSK ETHNTAYIGS DCYGQGQQNY  60
PNGATNILPR NEETIAQAPQ TELVVSFCKF NHSDNLKMGE LACAPNPYYD PYYGGMMAPY  120
GQHMVHPQFL DMHQVRMPLP LEMAQEPVYV NAKQYHAILR RRQSRAKAEL EKKLIKDRKP  180
YLHESRHQHA MRRMRSSGGR FAKKTEAEKN STSSSSSGMK LVNSESTESI NTHQEASGEM  240
VNSCNGHTYE ETRGGMVTSL GQQWSTMPSN NATPQRAVAM K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.13e-51NF-YA family protein