PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc002593.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | C2H2 | ||||||||
Protein Properties | Length: 260aa MW: 28103.1 Da PI: 9.4482 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13 | 0.00031 | 161 | 183 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+++F++ L H r+H Cse_sc002593.1_g030.1 161 HECSICHRTFPTGQALGGHKRRH 183 78*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MALEALNSPA STTTPPPSFH YKDTKFPTTT IIQDTWNKGK RSKRPRSTSN NADSDISSSV 60 SEPQHPTEEE YLAFCLMLLS RGGTGVGSEK PTPTQSPPRP PLVVHKCTVC NKGFGSYQAL 120 GGHKASHRKN TSDDQHHHPT TSNTTTTTSA SSVLKPSGRI HECSICHRTF PTGQALGGHK 180 RRHYDGGNNS GPAASGVTTS EKTSSSTHSQ PRDFDLNLLP VSPLGLNVDF VKKSQLFEEQ 240 EVESPHPAKK QRFSGGVANY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 5e-39 | C2H2 family protein |