PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002572.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 747aa MW: 85502.1 Da PI: 7.077

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002572.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.2	9.5e-06	173	197	5	29
HHHHHHHHHHHHHHHHHHHHCTSCC CS HLH 5 hnerErrRRdriNsafeeLrellPk 29 n+r rrRR+++N+++eeL l+ + Cse_sc002572.1_g020.1 173 ENQRRRRRREEVNQKIEELENLIQS 197 599*******************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 747 aa Download sequence
MSSVKDLETP LLSSSDEHEC RVNIDLDTLL DCDQNPYRFI GSDGYEVPGS STVDPFRNHT 60 PKAEGVYEWV KIIVCVPIAL VRLVLFGLCL CVGYVATKFA LNGWKDKQNP MPKWRCRHRA 120 NMQDYTNAHK ETVRSELRMA SVQQTMEMDI WEIKEKLAQR REQMAIRAYQ VEENQRRRRR 180 REEVNQKIEE LENLIQSFIR NPISAVKMPQ AVTKAPCYDD LAAREEKQVV EKTDFAGPIL 240 AANKELGQKL IDDDLDEPLM VLESDGKINK NKFSIVPIKQ SSTGKKNQAE NHKMCIWQII 300 KFKSGCEICL RHLWANARLK QEPVPAQRTW DPGITQYDVL KQHLEDKVYH WIKRRGKPAP 360 RETAPILVSN HVSYIDPIFF FYELFPTIVA SESHDSMPFV GTIIRAMQVI YVNRFSHQSR 420 KHAVNEIKRK ASSDRFPRLL LFPEGTTTNG RLLISFQHGA FIPGYPIQPV VVRYPHVHFD 480 QSWGHISLAT LMFRMFTQFH NFMEIEYLPV VTPSEHHKES AVRFAEKTGR AMARALNVVQ 540 TSHTFVDYMI LSKAADSGQE NPSLFVVEMA KIQELFHLSS SDALDFLDIF LAMNPDPSGS 600 VNFHDFSRVL RLKPSGVSEK MFEFIDVCKN RKITFKEFLV GSAHVLNQLL FRRACEIAFY 660 ESDADQDHYI SEQELGASLM PAIGSISTDE MHGLFNLFDG DADGRISKAD FVTCLRKNPL 720 LIALFASHVI DKDLNTNGAV GLLEEMV

Sequence ? help Back to Top

Protein Sequence Length: 747 aa Download sequence

MSSVKDLETP LLSSSDEHEC RVNIDLDTLL DCDQNPYRFI GSDGYEVPGS STVDPFRNHT  60
PKAEGVYEWV KIIVCVPIAL VRLVLFGLCL CVGYVATKFA LNGWKDKQNP MPKWRCRHRA  120
NMQDYTNAHK ETVRSELRMA SVQQTMEMDI WEIKEKLAQR REQMAIRAYQ VEENQRRRRR  180
REEVNQKIEE LENLIQSFIR NPISAVKMPQ AVTKAPCYDD LAAREEKQVV EKTDFAGPIL  240
AANKELGQKL IDDDLDEPLM VLESDGKINK NKFSIVPIKQ SSTGKKNQAE NHKMCIWQII  300
KFKSGCEICL RHLWANARLK QEPVPAQRTW DPGITQYDVL KQHLEDKVYH WIKRRGKPAP  360
RETAPILVSN HVSYIDPIFF FYELFPTIVA SESHDSMPFV GTIIRAMQVI YVNRFSHQSR  420
KHAVNEIKRK ASSDRFPRLL LFPEGTTTNG RLLISFQHGA FIPGYPIQPV VVRYPHVHFD  480
QSWGHISLAT LMFRMFTQFH NFMEIEYLPV VTPSEHHKES AVRFAEKTGR AMARALNVVQ  540
TSHTFVDYMI LSKAADSGQE NPSLFVVEMA KIQELFHLSS SDALDFLDIF LAMNPDPSGS  600
VNFHDFSRVL RLKPSGVSEK MFEFIDVCKN RKITFKEFLV GSAHVLNQLL FRRACEIAFY  660
ESDADQDHYI SEQELGASLM PAIGSISTDE MHGLFNLFDG DADGRISKAD FVTCLRKNPL  720
LIALFASHVI DKDLNTNGAV GLLEEMV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	175	181	QRRRRRR
2	176	181	RRRRRR