PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002537.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 345aa MW: 37857.3 Da PI: 6.5915

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002537.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	94.9	6.1e-30	143	196	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv++v++L G ++A+Pkti++lm+v+gLt+e+v+SHLQkYRl Cse_sc002537.1_g030.1 143 RPRLVWTPQLHKRFVDVVAHL-GVKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 196 59*****************.9*****************************8 PP
2	Myb_DNA-binding	48.3	2.3e-15	145	195	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vd+v+ lG + +ktI++ m+ +g+t++++ s++qky+ Cse_sc002537.1_g030.1 145 RLVWTPQLHKRFVDVVAHLGVKnaVPKTIMQLMNvEGLTRENVASHLQKYR 195 789***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MGEEVRITDF EPRVSDWESG LPNADDLLPL SQSLVPPELA SAFSITPEPH RSLLDVNRAS 60 NDTVLLLTGQ KSNHFDSFNN KFKGFGDNNV SNNNIVIDDD EIGDVVGDVN GDVSDSRKLR 120 RVGSGGFEEE GDSVSARTTT SKRPRLVWTP QLHKRFVDVV AHLGVKNAVP KTIMQLMNVE 180 GLTRENVASH LQKYRLYLKR MSGLSNEGPS SSDQLFASTP VPQSLHEGSG TNGYGNGNGN 240 GNGNGNGSGS GMMPMPYPPQ MVPMPYPPQM VGPPGGYHHG YESHPYNMMM QQRDWGGNKF 300 GSVLPYQHRM TPSIVDHKVV WSRPVMIYAY PDTAASYKAT PKGQW

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MGEEVRITDF EPRVSDWESG LPNADDLLPL SQSLVPPELA SAFSITPEPH RSLLDVNRAS  60
NDTVLLLTGQ KSNHFDSFNN KFKGFGDNNV SNNNIVIDDD EIGDVVGDVN GDVSDSRKLR  120
RVGSGGFEEE GDSVSARTTT SKRPRLVWTP QLHKRFVDVV AHLGVKNAVP KTIMQLMNVE  180
GLTRENVASH LQKYRLYLKR MSGLSNEGPS SSDQLFASTP VPQSLHEGSG TNGYGNGNGN  240
GNGNGNGSGS GMMPMPYPPQ MVPMPYPPQM VGPPGGYHHG YESHPYNMMM QQRDWGGNKF  300
GSVLPYQHRM TPSIVDHKVV WSRPVMIYAY PDTAASYKAT PKGQW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46640.2	8e-71	G2-like family protein