PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002465.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 309aa MW: 35701.2 Da PI: 7.364

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002465.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT eEde+l+++++ G g+W++ ++ g+ R++k+c++rw +yl Cse_sc002465.1_g020.1 14 RGRWTSEEDEILIKYIQANGEGCWRSLPKNAGLLRCGKSCRLRWINYL 61 8*****************************99**********97 PP
2	Myb_DNA-binding	57.5	3.1e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eEde +v+++k +G++ W++Ia +++ gRt++++k++w+++l Cse_sc002465.1_g020.1 67 RGNFTQEEDEFIVKLHKAMGNR-WSAIAGELP-GRTDNEIKNYWNSHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MGRTPCCEKV GLRRGRWTSE EDEILIKYIQ ANGEGCWRSL PKNAGLLRCG KSCRLRWINY 60 LRGDLKRGNF TQEEDEFIVK LHKAMGNRWS AIAGELPGRT DNEIKNYWNS HLSRKSYLFF 120 RAKSNSAQNS DNTPNIVNQA KRKLGRVSRR IAKKYNHERV LKNTTMPIIG KCKEQRVGNN 180 STLVSENIKE SQLCSNEIKT TEIDDLWFKD DESSFVLGHD VMDTNGILSI HDVDQIEKSL 240 TKVDFDNFKK NACNVEDKQD KSMSSNSSQI MGFGFEEELV NDWEMGFGFE ELNMYDYGGD 300 DGMFLWQWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	1e-73	MYB family protein