PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002433.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 359aa    MW: 40380.4 Da    PI: 4.4324
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002433.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.6e-102853241054
                            HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                            r+RR+riN+++  L+ l+P+      +K++ +++Le+AveY+k L
  Cse_sc002433.1_g060.1 285 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVEYVKFL 324
                            9******************97.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MECFGNFFDE EWSSLSTMFH SDEGSDLFAS QGLMSSQYDI GVNIEIPNLF MHSSDESSNS  60
DSFVVDDEHL VNVSNNVNPN FYQFFAQENI CSSGASNDTG SLSYPCHESF PLYHSNFVPS  120
PSNDVCDQSN EFCMMDEINN LSLPIQVFSD GSLYVRQGVA TENVGMENSL VRDKETPLKR  180
KHEMADAIDD EVNNEKTNKN PKKRIRVSKE NKNKKNVQPK KNQKIDETEV GNNNDNGERN  240
NGQSSSSCSS NDDLNESQDV DATNPNGKTR ASRGTATDPQ SLYARKRRER INERLRILQN  300
LVPNGTKVDI STMLEEAVEY VKFLKLQIQL LSSDDKWMYA PIAYNGMDMG LYQNIAGTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27740.14e-40bHLH family protein