PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002403.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CAMTA

Protein Properties

Length: 876aa MW: 98205.7 Da PI: 7.1438

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002403.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	167.5	2.2e-52	24	139	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 +e ++rwl++ ei++iL+n++k+elt +++ rp gsl Ly+rk++ryfrkDG++w+k kdgk+v+E+hekLKvg+v+vl+cyY+h+e Cse_sc002403.1_g060.1 24 QEaQHRWLRAAEICEILTNYDKFELTPTPAYRPAAGSLYLYDRKQLRYFRKDGHNWRK-KDGKSVKEAHEKLKVGSVDVLQCYYVHGE 110 5669**************************************************86.7************************ PP CG-1 90 enptfqrrcywlLeeelekivlvhylevk 118 +n++fqrrcyw+L+++le+ivlvhy++vk Cse_sc002403.1_g060.1 111 DNENFQRRCYWMLDKQLENIVLVHYRDVK 139 ************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 876 aa Download sequence
MADALDTTNI ANHQLLLGLN QIQQEAQHRW LRAAEICEIL TNYDKFELTP TPAYRPAAGS 60 LYLYDRKQLR YFRKDGHNWR KKDGKSVKEA HEKLKVGSVD VLQCYYVHGE DNENFQRRCY 120 WMLDKQLENI VLVHYRDVKE GCKSGVPHVL SVDPPNLLQS NEQTIAPDQT PHPSHVSVKR 180 NQQLMTSYDV GTYSLEQSIS EIPEVTVSPD PCSSMWTSIH GSLKNTATAD FLSHKLTDAR 240 LDTDSHSQDF SSSGNGLFPA AEQLLAGTET IYASKNDEAG GELKKLDSFG RWMDKEMGGD 300 CEDSLMASNS GNYWDVLETE KDQAEVSSLS HHIQLNTDSV GPSLAKEQLF TICDFAPDWA 360 YSGTETKVLI TGDFLGDKKC ITGSKWCCMF GETEVAAEFV TENAIRCQVP LCGAGRVPFY 420 ITCNNRIACS EVREFEYVQK PSTIAAANAT CGEDEFGLLI RLSKLLSSGA ERKWSGCSVV 480 NCEKCKLKDL FHSLIADKEG CWKRITEVFK GNCQELLIQN LLKDKLYDQL LYEAHEGCQG 540 LRMLDERGQG IIHLAAALGY EWAISPVVAA GMSPNFRDAH GRTALHWASF YGREETVVAL 600 VKLGAFAGAV DDPTPLNPGG QTAADLASIN GHKGIAGYLA EEDLTSHPSA LSGKHKNGSR 660 SREEEQESLA VAAVRRSALA AALIQDGFRA RSFRQRKVTT AINEFSEAEQ VVALASCSHK 720 VQKSSHYEDY LHVAASRIQH KYRGWKGKND FKKIRERIVK IQAHYRGHQV RKHYKKVVWS 780 VGIVEKAILR WRRKSHGLRG FRPELTSVGV DSIRAGEYDF LQIGQKQKYA GVEKALARVK 840 SMARQSQAQE QYTRMVHKFE QLSHYEVEED SRRTQE

Sequence ? help Back to Top

Protein Sequence Length: 876 aa Download sequence

MADALDTTNI ANHQLLLGLN QIQQEAQHRW LRAAEICEIL TNYDKFELTP TPAYRPAAGS  60
LYLYDRKQLR YFRKDGHNWR KKDGKSVKEA HEKLKVGSVD VLQCYYVHGE DNENFQRRCY  120
WMLDKQLENI VLVHYRDVKE GCKSGVPHVL SVDPPNLLQS NEQTIAPDQT PHPSHVSVKR  180
NQQLMTSYDV GTYSLEQSIS EIPEVTVSPD PCSSMWTSIH GSLKNTATAD FLSHKLTDAR  240
LDTDSHSQDF SSSGNGLFPA AEQLLAGTET IYASKNDEAG GELKKLDSFG RWMDKEMGGD  300
CEDSLMASNS GNYWDVLETE KDQAEVSSLS HHIQLNTDSV GPSLAKEQLF TICDFAPDWA  360
YSGTETKVLI TGDFLGDKKC ITGSKWCCMF GETEVAAEFV TENAIRCQVP LCGAGRVPFY  420
ITCNNRIACS EVREFEYVQK PSTIAAANAT CGEDEFGLLI RLSKLLSSGA ERKWSGCSVV  480
NCEKCKLKDL FHSLIADKEG CWKRITEVFK GNCQELLIQN LLKDKLYDQL LYEAHEGCQG  540
LRMLDERGQG IIHLAAALGY EWAISPVVAA GMSPNFRDAH GRTALHWASF YGREETVVAL  600
VKLGAFAGAV DDPTPLNPGG QTAADLASIN GHKGIAGYLA EEDLTSHPSA LSGKHKNGSR  660
SREEEQESLA VAAVRRSALA AALIQDGFRA RSFRQRKVTT AINEFSEAEQ VVALASCSHK  720
VQKSSHYEDY LHVAASRIQH KYRGWKGKND FKKIRERIVK IQAHYRGHQV RKHYKKVVWS  780
VGIVEKAILR WRRKSHGLRG FRPELTSVGV DSIRAGEYDF LQIGQKQKYA GVEKALARVK  840
SMARQSQAQE QYTRMVHKFE QLSHYEVEED SRRTQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.3	1e-177	CAMTA family protein