PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc002321.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | Nin-like | ||||||||
Protein Properties | Length: 130aa MW: 15436 Da PI: 10.6663 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 58.1 | 1.8e-18 | 4 | 50 | 6 | 52 |
RWP-RK 6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 s e++s+yF++p++ AAk +v+l++ K CR GI+ WP+Rk+ sl Cse_sc002321.1_g020.1 4 SREVISHYFHMPLHRAAKYFNVGLSLFKAHCRSVGIQCWPYRKLLSL 50 789****************************************9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MSFSREVISH YFHMPLHRAA KYFNVGLSLF KAHCRSVGIQ CWPYRKLLSL ERLINFFQGK 60 YGDSKTNENM QEIITKLREE KRRIEENPEL PITKNMKKLR QRLFKASYRK KNINLELSLA 120 TPTATKNNDT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 98 | 111 | KLRQRLFKASYRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18790.1 | 7e-25 | Nin-like family protein |