PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002292.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family M-type_MADS
Protein Properties Length: 424aa    MW: 47771.3 Da    PI: 6.8206
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002292.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF24.92.6e-082692952248
                            HHHHHHHHHHT-EEEEEEE-TTSEEEE CS
                 SRF-TF  22 KKAeELSvLCdaevaviifsstgklye 48 
                            KKA+ELS LC  ++ +ii s++g++ +
  Cse_sc002292.1_g020.1 269 KKAYELSALCSLDIGMIICSPSGQIET 295
                            9**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MTRACGLKTN NDMKLILELR SECLQEPHEP ASNSVTESYS KPKKPPIDHP NGFHSSSVTQ  60
AAAATALEVV VRQIEAKYPA LVFKQQLTAY VEKIYGIIRD NLKKELGSLL TLCIQAPRTS  120
KRVLRSDRSF GKDSQSSHWQ GMVDCLNTLL NTFKENFVCH PRRLHGHLKT WSIVSTLFST  180
LLKKILYVIL AGNPAPRTSK DMVDCLNTLL NKAHESPTIG DDNWWEPQYT NDNVCPQLCT  240
SSDQLSYNPY LWWTQVCTSS DQLSSSMKKK AYELSALCSL DIGMIICSPS GQIETLSWPN  300
QDDDGKTLND LIKSSRNQGE KRKKIVTWIS KGDTQNQTGE QQLDVKSKQF VSCSSQLGEQ  360
SGPSVSCHSQ LDMKSEKELR ELAMCLDNNI ERVKERIADD TSLIEDYGIM HPDDLDYLLN  420
KIMD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1321348KRKKIVTWISKGDTQNQTGEQQLDVKSK