PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002237.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 430aa    MW: 48928.1 Da    PI: 6.1428
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002237.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.52.1e-08133177247
                   FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                            +Y++YA + GF++++s+++k+ r+g + ++ ++C++egk ++ + +
  Cse_sc002237.1_g010.1 133 MYKAYALRGGFEIKISSQRKT-RSGFVQHKYLMCNREGKLRNINID 177
                            8****************9998.8899************98776555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MDNIGEITCV QVFEGSVGSV CDAGSEVMSV DDVEGVRIVE EGSEVMSVDD VEGVRIVEEG  60
LLAMNDAGDA ERVWFIVEDD IRSGETDDEN ETHVNGKSFE TPGGSVYWQP NMEPELIPKG  120
GVYFDTLDEA IRMYKAYALR GGFEIKISSQ RKTRSGFVQH KYLMCNREGK LRNINIDTLK  180
SKGNDKAIRN RNLRKMVYSE KLFVMKAKTA NIGATVAHHI YSSMKGYDLV YGQVMDFKNY  240
FRELNCFIGE GDSQMLINKM ENRKAYNMVF VPFTAIDNHR KSVTIAAGML KRSTLINFMI  300
CFESAMEKQR HIQEQLDFDS MDSMPKLKTK LMIEKHVALV YTRTIFLRVQ TEINEGIWDC  360
QIQNVQTGDG CEITLIRDKN AGEYRTLYKE KKKGKSEAVE KPKVARVQAM YKALPSIWVS  420
MSPHILCFQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-07FAR1 family protein