PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002184.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 342aa MW: 39713.6 Da PI: 10.0681

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002184.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.3	1.6e-20	58	163	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrn.geitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkek 72 Y++YA+e GF+vrk ++ +k+n +e ++ f+C ++g++ ++k + ++++rr+ra+ r+gC+a+l++kk++ Cse_sc002184.1_g010.1 58 AYKDYAREGGFEVRKGGQRVTKDNkEEPNNKYFYCVRQGFKPQHKPSnqktdkqqttnplgvnKVTKRRKRASCRCGCTAQLRLKKTT 145 5************999988655156788999***98887777899*******9999****************** PP FAR1 73 dgkwevtkleleHnHela 90 dgk++v+k+ ++HnH+l+ Cse_sc002184.1_g010.1 146 DGKYVVSKFLEKHNHSLV 163 *************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MLSAVVLKKT DLQIEQEGFM VIADFQPTPN GTKYWVPRVD KKPFEGQVFD NIELAQKAYK 60 DYAREGGFEV RKGGQRVTKD NKEEPNNKYF YCVRQGFKPQ HKPSNQKTDK QQTTNPLGVN 120 KVTKRRKRAS CRCGCTAQLR LKKTTDGKYV VSKFLEKHNH SLVYEDDMKY LRASRRLTFS 180 KQQLINQLSI ANIGPVRSWK VMKEVYGGFE YIGAIDVDCK NYRRGLNEFI GNRDAQMVVD 240 KLLSRAEYFE DYSVEYKQDK KSKELVGLLW ADEQAKCNYA AFGDVVSFDA TFRSNRYNMI 300 LVPFTGIDNH SRCVIFAAAL LSSEHAKRYT WLLKRFKKIF IQ

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MLSAVVLKKT DLQIEQEGFM VIADFQPTPN GTKYWVPRVD KKPFEGQVFD NIELAQKAYK  60
DYAREGGFEV RKGGQRVTKD NKEEPNNKYF YCVRQGFKPQ HKPSNQKTDK QQTTNPLGVN  120
KVTKRRKRAS CRCGCTAQLR LKKTTDGKYV VSKFLEKHNH SLVYEDDMKY LRASRRLTFS  180
KQQLINQLSI ANIGPVRSWK VMKEVYGGFE YIGAIDVDCK NYRRGLNEFI GNRDAQMVVD  240
KLLSRAEYFE DYSVEYKQDK KSKELVGLLW ADEQAKCNYA AFGDVVSFDA TFRSNRYNMI  300
LVPFTGIDNH SRCVIFAAAL LSSEHAKRYT WLLKRFKKIF IQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-44	FAR1 family protein