PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002123.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 378aa    MW: 42674.1 Da    PI: 4.3896
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002123.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15e-194392255
                    AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  Cse_sc002123.1_g080.1 43 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 92
                           789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MARKRKLAND QEHTMSDHPE ENMPWDDSST AAVLGGPRRA RKRFVGVRQR PSGRWVAEIK  60
DTIQKIRVWL GTFDTAEEAA RAYDEAACLL RGANTRTNFW PSSQSTLTTP ALPSKITNLL  120
LHRLRARNNS LAASAAAASS SQLSVNYQDD KKQQEEYKDD LGDFHDTFFT DFLNDTDEYV  180
PYNDEIMPSL PVKEDSYLKE PENLDIDNHD DHDHMMSQCS SGDHMEDDYD EESSDMGVID  240
FGFIDELGSS CNYSPFEIAQ EIASDAIQEE VYGEGEEPLT IAEAMKRMKY ERKYSASLYA  300
FNGIPECLRL KLGLGGSVKS RERSKMQRTS LQGLDKKEDE ELKKDVEGED VIASTSNVID  360
GELSLWNSLD LPTICYVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.16e-22ERF family protein