PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002064.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 156aa    MW: 18324 Da    PI: 9.8395
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002064.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK69.83.7e-22450652
                 RWP-RK  6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                           s e++s+yF+++i++A keL+v+lT+LK  CR  GI+RWP+Rk+ks+
  Cse_sc002064.1_g070.1  4 SKEKISQYFDMTIRQAEKELNVGLTALKYNCRDAGIQRWPYRKLKSI 50
                           5799*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MAYSKEKISQ YFDMTIRQAE KELNVGLTAL KYNCRDAGIQ RWPYRKLKSI KVMINNFQDE  60
NGGAKPDDNK KEIIRRLQEE KRQLEEKPNL QLAKNTKKLR QCYFKAKYKK RKTMGLLLLL  120
SNQTPTEAIP LQSVSPSNDS NYEEMDDAYG SRCYEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66990.12e-24Nin-like family protein