PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002040.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 1860aa MW: 210569 Da PI: 6.9627

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002040.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.7	6.9e-17	1353	1447	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtk 80 +Y +YA+evGF +rks++k+ r+g ++++ +vC++eg +++ + + +k+ rt++ tgCka+ + ++ + k+++t+ Cse_sc002040.1_g060.1 1353 MYMRYASEVGFGIRKSTQKRL-RDGFVKEKYLVCNREGCPKKIRLNtlapkkGDKQVRTSNFRITGCKARAVFHMVPgSRKYRLTT 1437 8*************99998.9999**********998888899887788888999999********99**** PP FAR1 81 leleHnHela 90 ++ eHnHel Cse_sc002040.1_g060.1 1438 FDVEHNHELD 1447 ******95 PP

Sequence ? help Back to Top
Protein Sequence Length: 1860 aa Download sequence
MAEVIASTLI EAVIQKLASE AVKQVVRAKG IHSELKKLGK TLFKIQALLN DAWNKEITNE 60 AVQVWLNDLQ HLAYDIDDVI DDLATEAKHN ELTDQSRAST SKIRKLIPAC CTNFSLSSRL 120 SKRLDDITNK LQDLEKEKVT LGLEMKSGSL DVNDDRPKDR NRQYETSLLV DASSIVGRQG 180 DKDVLVQRLL TDEPCNKNFS IMPIVGMGGL GKTTLARLLY DEKKVKDHFD LKAWVCVSDE 240 WDSFQISKII FLSVSGEDKK FEDFNLLQVA LRDQLRDKRF VLILDDVWSE SREDWETLVR 300 PFHACSSGSK IIMTTRKEQL LKKLGYDNSD RLQRLSQDDA VSLFAQHALG ANNFDSHPTF 360 KEHGEGIVKK CDGLPLALIT LGRLMRTKKD ELEWKEILDS EIWRLKEGDE IIPALRLSYR 420 ELPADLKQLF AYCSLFAKDY AFDKEDVVLL WMGEGFLHRV RLSKSTVERL GHECFDELLS 480 RSFFQHSPND ESLFVMHDLM NDLATSVAGD FFFRLEKEMG KNVRKQTLDK CRHMSFVCEK 540 YVAYKKFEGI EGAKGLRTLF SVGVKEWSSQ QNYLSNKVLA DLLPKLQFLR VLSLSGYEIS 600 EVPESIGELK HLRYLNLSQT KITHFPENVC DLYNLETLIL FGCSCLTKFP NNFTKLNSLR 660 HLDIRDTPLL KDLPVGVAKL KSLQTLSKIV IGGDNDFSIT QLKYFENLHG KVSIEGLEKV 720 KNAMEAREAD LSQKRLTELK VEWSDVSYAS RKETTDNDVL DALKPYTDSL KRLGIVNYLG 780 LEFPKWVGEP SFRKLARVSI HGCKKCTSLP PLGQLPSLKK LSIQDMEDVK DMGLEFLGTD 840 VAFPLLEILE FIGMSRWEVW STYSRSGVGD SVFPCLKELH IINCPNLVEV SLKAPLLSLR 900 YLRINECGVG LLRSLVHTAP SVTKLDIRSI SGLTNEVWRG VILDLKAVEE LEVKRCDEIR 960 YLWESKETEA SSKGAFREKD EEEYNNGSNL LTSFSSLMVW GCENFKHLSC PDNIEMLGIY 1020 YCDSITCVSF SMGMGGQKLK SVTIHECKKL MIKEELGEGG KKNMLLINSK SMPMLEFVQI 1080 IDHPNVAPII DFGGELKKPI SEWGPLKFPT SLVGLTLRGS KEKEEATYWS QLSHLHLPSS 1140 LTRLLIDSFD ELETVSEGLQ HLTSLQHLLI SECPKMKDLP EKLLPSLLSL RIWGCPDLKE 1200 RCNWFAVAVC VSEHVKWSVD KCLIARSDHD RISNVEADWG REWYSGRESG TSTRSATPPR 1260 GARVVNFGMD IFDLIEVPVG DDSIDLDVTS SNCASNVDDN ASSSSGLKTP SSFIHHDFID 1320 TPGGSIFWVP RVGASVLPIL FSVYDSVEDC ISMYMRYASE VGFGIRKSTQ KRLRDGFVKE 1380 KYLVCNREGC PKKIRLNTLA PKKGDKQVRT SNFRITGCKA RAVFHMVPGS RKYRLTTFDV 1440 EHNHELDHVE YKHLSKSERK LTYTEQLFIV KASNYNIGAT RAHSLYTGLK GSSALVHGTE 1500 TEFNNLVRGL GRHGFLLFFV DSPLCGLMRT TSRSESENSF FSNFTSPTCT LVKFMVCYES 1560 AMEKQRYIQE RLDHRSIDSF PTLLTPLGIE IHAARFYTRK LFVLVQKEII AGSWLCSIKS 1620 KICGDGCDVS VISEEKPDAD IVPTVVDDES TSENTEEELN LYQKDIGEYE NCKVVSIPDQ 1680 YLLRRWTRDL IPADLRRQKA RYGQNNEEIE RLAIEATGLV ESYVHMMSNN KGKLTSFVDK 1740 LKKLKTEVEA DLPTVPSRNV SEIVEEFMGI KKPTKIYVKN PSKASNKGFM RERIKGGREK 1800 AFDKSKKQKK SCSICGSMEH NRTTCLDKGK YLTNNAEVGG SSAEGVLVQV EVESSAQPLQ

Sequence ? help Back to Top

Protein Sequence Length: 1860 aa Download sequence

MAEVIASTLI EAVIQKLASE AVKQVVRAKG IHSELKKLGK TLFKIQALLN DAWNKEITNE  60
AVQVWLNDLQ HLAYDIDDVI DDLATEAKHN ELTDQSRAST SKIRKLIPAC CTNFSLSSRL  120
SKRLDDITNK LQDLEKEKVT LGLEMKSGSL DVNDDRPKDR NRQYETSLLV DASSIVGRQG  180
DKDVLVQRLL TDEPCNKNFS IMPIVGMGGL GKTTLARLLY DEKKVKDHFD LKAWVCVSDE  240
WDSFQISKII FLSVSGEDKK FEDFNLLQVA LRDQLRDKRF VLILDDVWSE SREDWETLVR  300
PFHACSSGSK IIMTTRKEQL LKKLGYDNSD RLQRLSQDDA VSLFAQHALG ANNFDSHPTF  360
KEHGEGIVKK CDGLPLALIT LGRLMRTKKD ELEWKEILDS EIWRLKEGDE IIPALRLSYR  420
ELPADLKQLF AYCSLFAKDY AFDKEDVVLL WMGEGFLHRV RLSKSTVERL GHECFDELLS  480
RSFFQHSPND ESLFVMHDLM NDLATSVAGD FFFRLEKEMG KNVRKQTLDK CRHMSFVCEK  540
YVAYKKFEGI EGAKGLRTLF SVGVKEWSSQ QNYLSNKVLA DLLPKLQFLR VLSLSGYEIS  600
EVPESIGELK HLRYLNLSQT KITHFPENVC DLYNLETLIL FGCSCLTKFP NNFTKLNSLR  660
HLDIRDTPLL KDLPVGVAKL KSLQTLSKIV IGGDNDFSIT QLKYFENLHG KVSIEGLEKV  720
KNAMEAREAD LSQKRLTELK VEWSDVSYAS RKETTDNDVL DALKPYTDSL KRLGIVNYLG  780
LEFPKWVGEP SFRKLARVSI HGCKKCTSLP PLGQLPSLKK LSIQDMEDVK DMGLEFLGTD  840
VAFPLLEILE FIGMSRWEVW STYSRSGVGD SVFPCLKELH IINCPNLVEV SLKAPLLSLR  900
YLRINECGVG LLRSLVHTAP SVTKLDIRSI SGLTNEVWRG VILDLKAVEE LEVKRCDEIR  960
YLWESKETEA SSKGAFREKD EEEYNNGSNL LTSFSSLMVW GCENFKHLSC PDNIEMLGIY  1020
YCDSITCVSF SMGMGGQKLK SVTIHECKKL MIKEELGEGG KKNMLLINSK SMPMLEFVQI  1080
IDHPNVAPII DFGGELKKPI SEWGPLKFPT SLVGLTLRGS KEKEEATYWS QLSHLHLPSS  1140
LTRLLIDSFD ELETVSEGLQ HLTSLQHLLI SECPKMKDLP EKLLPSLLSL RIWGCPDLKE  1200
RCNWFAVAVC VSEHVKWSVD KCLIARSDHD RISNVEADWG REWYSGRESG TSTRSATPPR  1260
GARVVNFGMD IFDLIEVPVG DDSIDLDVTS SNCASNVDDN ASSSSGLKTP SSFIHHDFID  1320
TPGGSIFWVP RVGASVLPIL FSVYDSVEDC ISMYMRYASE VGFGIRKSTQ KRLRDGFVKE  1380
KYLVCNREGC PKKIRLNTLA PKKGDKQVRT SNFRITGCKA RAVFHMVPGS RKYRLTTFDV  1440
EHNHELDHVE YKHLSKSERK LTYTEQLFIV KASNYNIGAT RAHSLYTGLK GSSALVHGTE  1500
TEFNNLVRGL GRHGFLLFFV DSPLCGLMRT TSRSESENSF FSNFTSPTCT LVKFMVCYES  1560
AMEKQRYIQE RLDHRSIDSF PTLLTPLGIE IHAARFYTRK LFVLVQKEII AGSWLCSIKS  1620
KICGDGCDVS VISEEKPDAD IVPTVVDDES TSENTEEELN LYQKDIGEYE NCKVVSIPDQ  1680
YLLRRWTRDL IPADLRRQKA RYGQNNEEIE RLAIEATGLV ESYVHMMSNN KGKLTSFVDK  1740
LKKLKTEVEA DLPTVPSRNV SEIVEEFMGI KKPTKIYVKN PSKASNKGFM RERIKGGREK  1800
AFDKSKKQKK SCSICGSMEH NRTTCLDKGK YLTNNAEVGG SSAEGVLVQV EVESSAQPLQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1739	1744	DKLKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45260.1	8e-13	WRKY family protein