PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001997.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 428aa MW: 49542.8 Da PI: 10.0992

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001997.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.1	2.9e-23	85	190	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkek 72 +fY+eYA+e+GF+vr+ +k++++ng + f Cs+eg + + k++ ++ +rr+ra+ r+gCka++++++++ Cse_sc001997.1_g010.1 85 QFYKEYAREAGFEVRIGGQKNREKNGYPSVKYFICSREGLKPPPKTDklqtdkskpdniesvsKVIKRRKRASIRCGCKAQIHLRRTE 172 6*************************************99999889*********999999***************** PP FAR1 73 dgkwevtkleleHnHela 90 d+k++v+++ ++HnH+l+ Cse_sc001997.1_g010.1 173 DNKYYVHTFFEKHNHSLV 190 **************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MVRVVKWQPQ RWFEHGDGFN PFRVGEPSTP QSTNTVQDNV DVDAQNAPQV GSYQPTPPGS 60 KFWIPEAKKK PLEGTRFDTL DIALQFYKEY AREAGFEVRI GGQKNREKNG YPSVKYFICS 120 REGLKPPPKT DKLQTDKSKP DNIESVSKVI KRRKRASIRC GCKAQIHLRR TEDNKYYVHT 180 FFEKHNHSLV HDDDYKYLRA ARKLTFPKQQ LLHQLSNANI GPTRAWKVLI QMGGGFENIG 240 FTDVECRNYR RGLNEFIGQR DAQMVVEKLL SRQEYCTNFS VEYKQHKKDK TLIGLFWVDE 300 QAKLNYDAFG DVVSFDATFR SNRYNMVLVP FTGIDNHNRC ILFGAALLAS EAAKRYTWLL 360 KRFKKIFGSA PKVVVTDQDP LMKIAIEKIF PESRHRLCMW HIMQKLTGKV GPTLCSNTNF 420 KQRLCDIV

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MVRVVKWQPQ RWFEHGDGFN PFRVGEPSTP QSTNTVQDNV DVDAQNAPQV GSYQPTPPGS  60
KFWIPEAKKK PLEGTRFDTL DIALQFYKEY AREAGFEVRI GGQKNREKNG YPSVKYFICS  120
REGLKPPPKT DKLQTDKSKP DNIESVSKVI KRRKRASIRC GCKAQIHLRR TEDNKYYVHT  180
FFEKHNHSLV HDDDYKYLRA ARKLTFPKQQ LLHQLSNANI GPTRAWKVLI QMGGGFENIG  240
FTDVECRNYR RGLNEFIGQR DAQMVVEKLL SRQEYCTNFS VEYKQHKKDK TLIGLFWVDE  300
QAKLNYDAFG DVVSFDATFR SNRYNMVLVP FTGIDNHNRC ILFGAALLAS EAAKRYTWLL  360
KRFKKIFGSA PKVVVTDQDP LMKIAIEKIF PESRHRLCMW HIMQKLTGKV GPTLCSNTNF  420
KQRLCDIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-63	FAR1 family protein