PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc001894.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 176aa MW: 20205.1 Da PI: 6.9529 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.8 | 9.2e-09 | 3 | 49 | 5 | 53 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 h e+Er+RR+++ + + LrellP + ++ s ++ +A +YIk+ Cse_sc001894.1_g020.1 3 HREIERQRRQDMAKLHASLRELLPMEF--VKGNRSISDHMHQAAHYIKQ 49 99***********************65..9999***************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MLHREIERQR RQDMAKLHAS LRELLPMEFV KGNRSISDHM HQAAHYIKQT EENVNQLGMR 60 RDQLKNSLDT IGSSMNHLFN TVSVNYCNGG VEILINSCTI EDGFHLSRVL NALVEEGLNV 120 TRCTSTKVND RLLHSIQSEV PYYDLQQIIA IDLALIDLSM LQQKLVFVSN TRPNFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51780.1 | 2e-31 | bHLH family protein |