PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001859.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 382aa MW: 44353.2 Da PI: 10.0211

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001859.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.8	4.9e-20	73	177	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkekd 73 Y++YAke GF+vrk +k+ ++n+ + f+C ++g++ k + ++ +rr+ra+ r+gC+a+l++kk+ d Cse_sc001859.1_g030.1 73 AYKDYAKEGGFEVRKGGQKNYNKNEDPSLKYFYCVRQGFKPVPKPEnsiadksqttnplgvnKVIKRRKRASCRCGCTAQLRLKKRPD 160 5*************9999999999*********9877776799*******999999****************** PP FAR1 74 gkwevtkleleHnHela 90 gk+ vtk+ ++HnH+l+ Cse_sc001859.1_g030.1 161 GKYFVTKFFEKHNHSLV 177 ************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MAEHQHHVEG EPVTPRAVHN EQSTPGEGYF TPPEHQDGSF QPTPNGTRFW VPKVTTKPKE 60 GMVFDTLDIA LKAYKDYAKE GGFEVRKGGQ KNYNKNEDPS LKYFYCVRQG FKPVPKPENS 120 IADKSQTTNP LGVNKVIKRR KRASCRCGCT AQLRLKKRPD GKYFVTKFFE KHNHSLVYQD 180 DIKYLRTNRR LTFTKQQILN QLSNANIGPV RSWKVLKEMY VEYKQDKDTK ELIGLFWADE 240 EAKRNYAAFG TPWYVYMYLI TCEYVVICKY VNLNVSSVSE HIGFTTTHRY NMVLVPFTGI 300 DNHNRCVIFA AALLASESAK RYTWLLKRFK KVFINVPKVV VTDQDPAMKI AIEKILPDTR 360 HRLCMWHIMQ KLTTKVFVIT NM

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MAEHQHHVEG EPVTPRAVHN EQSTPGEGYF TPPEHQDGSF QPTPNGTRFW VPKVTTKPKE  60
GMVFDTLDIA LKAYKDYAKE GGFEVRKGGQ KNYNKNEDPS LKYFYCVRQG FKPVPKPENS  120
IADKSQTTNP LGVNKVIKRR KRASCRCGCT AQLRLKKRPD GKYFVTKFFE KHNHSLVYQD  180
DIKYLRTNRR LTFTKQQILN QLSNANIGPV RSWKVLKEMY VEYKQDKDTK ELIGLFWADE  240
EAKRNYAAFG TPWYVYMYLI TCEYVVICKY VNLNVSSVSE HIGFTTTHRY NMVLVPFTGI  300
DNHNRCVIFA AALLASESAK RYTWLLKRFK KVFINVPKVV VTDQDPAMKI AIEKILPDTR  360
HRLCMWHIMQ KLTTKVFVIT NM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-29	FAR1 family protein