PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc001856.1_g070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | BBR-BPC | ||||||||
Protein Properties | Length: 164aa MW: 18416.2 Da PI: 9.632 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 142.7 | 7.2e-44 | 78 | 149 | 217 | 288 |
GAGA_bind 217 GalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdh 288 G+++ CY+WG+GGWqSaCCtttiS yPLP+stkrrgaRiagrKmSqgafkk+Lek+a+e y+++ +++L+ h Cse_sc001856.1_g070.1 78 GVQQLCYRWGSGGWQSACCTTTISLYPLPMSTKRRGARIAGRKMSQGAFKKVLEKVASESYNFASAINLRLH 149 899******************************************************************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 164 aa Download sequence |
MSSSLDAAGE PIPTSMVSIS GIEKHSEFYP IAKQSRMTKF FFRVHSVIGS MYNFMDDDGL 60 NIRNWGYYEP PSFKEHLGVQ QLCYRWGSGG WQSACCTTTI SLYPLPMSTK RRGARIAGRK 120 MSQGAFKKVL EKVASESYNF ASAINLRLHL NMALTSLTPW PCLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G01930.1 | 4e-37 | BBR-BPC family protein |