PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001832.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 299aa    MW: 34097.7 Da    PI: 5.0573
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001832.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.81.6e-081251704791
                   FAR1  47 ktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                             ++k+ r+r+   tgC a++k+ ++  +gk+++ k++  HnH+l+p
  Cse_sc001832.1_g050.1 125 GNDKAIRNRNLRVTGCMARVKLDLDPvSGKYKLVKFNPRHNHTLCP 170
                            2578899*************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MDNIGEITCV QVVEGSAGSV CDAEQNESIE LGSVSSVCMV DSVERNQNVE GGSEVMSVDD  60
VERVRIVEEG SEVMSVDDVE GVRIVEEGLL AMNDAGDVER VRFIVEDDIR RKLRNINIDT  120
LKSQGNDKAI RNRNLRVTGC MARVKLDLDP VSGKYKLVKF NPRHNHTLCP EVYRHLSKTE  180
RKMVYSEKLF VMKAKTANIG ATVAHHIYSS MKGYDLVHEQ VMDFKNYFRE LNCFIGEGDS  240
QMLINKTENR KTYVPNFSFH YKVEDSELVA LFWADKVMKC NFEEFGDIIY FDAMFRTNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-13FAR1 family protein