PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001743.1_g100.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 333aa    MW: 38834.1 Da    PI: 9.1633
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001743.1_g100.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR148.52.8e-15105212190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkk 70 
                            ++Y eYA+++ Fs+rks++k++  ng it++   C+k g ++++  k                  +++e+r+++ t t+Cka +k k+
  Cse_sc001743.1_g100.1 105 NMYLEYAQKARFSIRKSTTKRK--NGDITHKYILCNKAGLPRKTVVKdtlvdkqlnennqeevakKTRENRNSNFTVTDCKAGVKFKR 190
                            58**************998877..999**************99988889**************988888889999************* PP

                   FAR1  71 ek.dgkwe.vtkleleHnHela 90 
                             + +  ++ ++++ ++HnH+l 
  Cse_sc001743.1_g100.1 191 IHgTPAYRlLYEFTENHNHPLL 212
                            *9966776269*********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
METKCFALSP IVLRLAIRQR TWKTNPFNCC PPRYKTKNMD SKCLLAQNVD FDKTGLDDRS  60
DFEGSESDDE VVPTPNGHKY WIPDVPFEEK PTEDDVFDSF DEAYNMYLEY AQKARFSIRK  120
STTKRKNGDI THKYILCNKA GLPRKTVVKD TLVDKQLNEN NQEEVAKKTR ENRNSNFTVT  180
DCKAGVKFKR IHGTPAYRLL YEFTENHNHP LLDENNMDLS TAKRKLDFSD KLFIHRASLS  240
NIGPTKAHRL RVAFMGGYDK VRGKPSDWKN FRRSLNKYIG PRDAQMLVDK MNDRKKHVPN  300
FTFEYHCVSD DICPFHGHRP PPKVCYFWGC INE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.13e-10FAR1 family protein