PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc001740.1_g070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 332aa MW: 36919.3 Da PI: 5.4001 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.7 | 1.3e-10 | 154 | 197 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + Er+RR+ +++++ Lr l+P+ +K++Ka+i+ A +YI++Lq Cse_sc001740.1_g070.1 154 ISERKRRSGMKEKLYALRALVPNI-----TKMDKASIVGDAARYIHDLQ 197 67*********************7.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MEYSIGHFDN SNFSMFQPDI TQETNFEHLI SAIQCESTDS DEKFCLDYEC NHFTNACMAM 60 QLLPQLYGHN EASDGIGNGN FNNCNASDTG NDNGIGIGFY DVMDPNLNAI WNQEEVDVKV 120 FGDDDSSETV TTRNPDTQRR SGGGVKGDRT RTLISERKRR SGMKEKLYAL RALVPNITKM 180 DKASIVGDAA RYIHDLQTQA RNLRSELATI EATKNHQMSS QNSSKTHLSK SLPILKKISK 240 MDISNVEEKG YYVKLVCNKG RGVAVALHKA LESITSFQVQ CSNLATAGDN FVLTFILNVT 300 TCEFDISLPN LKLWLSGAFL NQGFEFSTFP SP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28160.1 | 1e-67 | bHLH family protein |